RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 TMEM31Q5JXX7 168 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 SAXO2Q658L1 398 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 DNAJC5GQ8N7S2 189 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 PROKR2Q8NFJ6 384 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 OR8J1Q8NGP2 316 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 SLC7A13Q8TCU3 470 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 SMPDL3AQ92484 453 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 NEURL3Q96EH8 262 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 OTUB1Q96FW1 271 aaPredicted RBP11.81□□□□□ -0.52
RNF4-222ENST00000541204 C17orf62Q9BQA9 187 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 MENTQ9BUN1 341 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 TEX101Q9BY14 249 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 MCOLN1Q9GZU1 580 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 TEX10Q9NXF1 929 aaPredicted RBP11.81□□□□□ -0.52
RNF4-222ENST00000541204 OBP2AQ9NY56 170 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 NDOR1Q9UHB4 597 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 ICKQ9UPZ9 632 aa11.81□□□□□ -0.52
RNF4-222ENST00000541204 TRBV23OR9-2A0A075B6M9 112 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 ANHXE9PGG2 379 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 K7EQS6 105 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 FAAHO00519 579 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 LRRTM2O43300 516 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 PRKYO43930 277 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 RPN2P04844 631 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 FHP07954 510 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 C5AR1P21730 350 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 GSTM5P46439 218 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 LSM11P83369 360 aaKnown RBP eCLIP11.8□□□□□ -0.52
RNF4-222ENST00000541204 DLX2Q07687 328 aaPredicted RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 MLLT11Q13015 90 aaPredicted RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 C1DQ13901 141 aaKnown RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 THOC7Q6I9Y2 204 aaKnown RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 C22orf42Q6IC83 251 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 USP30Q70CQ3 517 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 IKBIPQ70UQ0 350 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 OR9Q1Q8NGQ5 310 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 TTYH2Q9BSA4 534 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 ZNF717Q9BY31 904 aaPredicted RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 SLC28A3Q9HAS3 691 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 A4GALTQ9NPC4 353 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 CD93Q9NPY3 652 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 PHPT1Q9NRX4 125 aaPredicted RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 TXNL4BQ9NX01 149 aaKnown RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 KIAA1549LQ6ZVL6 1849 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 CENPXA8MT69 81 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 TMPRSS11DO60235 418 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 TP53P04637 393 aaPredicted RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 LAMP2P13473 410 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 DDCP20711 480 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 CLDN2P57739 230 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 HYAL1Q12794 435 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 HYAL2Q12891 473 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 HNRNPA0Q13151 305 aaKnown RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 SPDYE7PQ495Y7 208 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 ATAT1Q5SQI0 421 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 C6orf120Q7Z4R8 191 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 HMGN2P46Q86SG4 172 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 UBE2J2Q8N2K1 259 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 TP53I13Q8NBR0 393 aaPredicted RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 LILRB4Q8NHJ6 448 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 SLC25A46Q96AG3 418 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 TM4SF18Q96CE8 201 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 ZNF354BQ96LW1 612 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 WDFY2Q96P53 400 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 MS4A8Q9BY19 250 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 NDEL1Q9GZM8 345 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 AHSPQ9NZD4 102 aa11.8□□□□□ -0.52
RNF4-222ENST00000541204 YARS2Q9Y2Z4 477 aaKnown RBP11.8□□□□□ -0.52
RNF4-222ENST00000541204 IQCMA0A1B0GVH7 501 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 A0A1W2PQL4 384 aaPredicted RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 SLC35F4A4IF30 521 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 HMGN4O00479 90 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 APOL3O95236 402 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 MSL3P1P0C860 447 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 ALPPL2P10696 532 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 BSGP35613 385 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 DDOSTP39656 456 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 ETV5P41161 510 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 ETV1P50549 477 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 FLYWCH1Q4VC44 716 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 FAM92BQ6ZTR7 304 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 NUDT18Q6ZVK8 323 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 OLIG3Q7RTU3 272 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 COMTD1Q86VU5 262 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 OR52I1Q8NGK6 324 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 SNX18Q96RF0 628 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 NELL2Q99435 816 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 SLC17A9Q9BYT1 436 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 MIXL1Q9H2W2 232 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 LHX9Q9NQ69 397 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 SEC14L3Q9UDX4 400 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 CARD8Q9Y2G2 431 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 COL4A3Q01955 1670 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 DOCK8Q8NF50 2099 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 IGKV1-8A0A0C4DH67 115 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 M0R3H8 397 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 PDPK1O15530 556 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 NME6O75414 186 aaPredicted RBP11.79□□□□□ -0.52
RNF4-222ENST00000541204 ADH1BP00325 375 aa11.79□□□□□ -0.52
RNF4-222ENST00000541204 CEACAM5P06731 702 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms