RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 NRBF2Q96F24 287 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PYURFQ96I23 114 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 EGLN2Q96KS0 407 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 F2RL3Q96RI0 385 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 BBS4Q96RK4 519 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ZNF347Q96SE7 839 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PKP2Q99959 881 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ZFYVE21Q9BQ24 234 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 DPH2Q9BQC3 489 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 NPLQ9BXD5 320 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 SLC6A16Q9GZN6 736 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 CHRNA10Q9GZZ6 450 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ING2Q9H160 280 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 XKR8Q9H6D3 395 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 CACYBPQ9HB71 228 aaKnown RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 C3orf14Q9HBI5 128 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 LYRM4Q9HD34 91 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 HRASLS2Q9NWW9 162 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 SLC25A37Q9NYZ2 338 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 SLAMF8Q9P0V8 285 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 IFT80Q9P2H3 777 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 ENOPH1Q9UHY7 261 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 ANGPT4Q9Y264 503 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PCYT1BQ9Y5K3 369 aaPredicted RBP7.85□□□□□ -1.15
CHD4-208ENST00000540960 ZNF780BQ9Y6R6 833 aa7.85□□□□□ -1.15
CHD4-208ENST00000540960 PIKFYVEQ9Y2I7 2098 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 A0A0A6YYD5 115 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 TCRBV5S2A0A599 114 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 GSAPA4D1B5 854 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 OR6C74A6NCV1 312 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 DUXAA6NLW8 204 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 C5orf58C9J3I9 102 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 ERI3O43414 337 aaKnown RBP7.84□□□□□ -1.15
CHD4-208ENST00000540960 PIM1P11309 404 aaPredicted RBP7.84□□□□□ -1.15
CHD4-208ENST00000540960 CSNK2A2P19784 350 aaPredicted RBP7.84□□□□□ -1.15
CHD4-208ENST00000540960 ATP5A1P25705 553 aaKnown RBP7.84□□□□□ -1.15
CHD4-208ENST00000540960 AK4P27144 223 aaPredicted RBP7.84□□□□□ -1.15
CHD4-208ENST00000540960 PEX2P28328 305 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 PTPN6P29350 595 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 BCL6P41182 706 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 GTF2A1P52655 376 aaPredicted RBP7.84□□□□□ -1.15
CHD4-208ENST00000540960 EMP3P54852 163 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 OR4D2P58180 307 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 PHC1P78364 1004 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 PRR5P85299 388 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 MC2RQ01718 297 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 HHEXQ03014 270 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 SLAMF1Q13291 335 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 GPR18Q14330 331 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 RGNQ15493 299 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 CDSNQ15517 529 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.84□□□□□ -1.15
CHD4-208ENST00000540960 TOR1AIP1Q5JTV8 583 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 DCAF10Q5QP82 559 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 PRAMEF8Q5VWM4 474 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 PRAMEF7Q5VXH5 474 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 FIGLAQ6QHK4 219 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 SPESP1Q6UW49 350 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 DNAJC14Q6Y2X3 702 aaPredicted RBP7.84□□□□□ -1.15
CHD4-208ENST00000540960 VN1R5Q7Z5H4 357 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 MRGPRGQ86SM5 289 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 KRT73Q86Y46 540 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 NRROSQ86YC3 692 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 HIPK1Q86Z02 1210 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 ST13P4Q8IZP2 240 aaPredicted RBP7.84□□□□□ -1.15
CHD4-208ENST00000540960 TMEM102Q8N9M5 508 aaPredicted RBP7.84□□□□□ -1.15
CHD4-208ENST00000540960 ANKRD53Q8N9V6 530 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 ZNF740Q8NDX6 193 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 OR56A1Q8NGH5 318 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 PSMA8Q8TAA3 256 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 ZFP90Q8TF47 636 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 NUDT8Q8WV74 236 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 MS4A6EQ96DS6 147 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 NEURL3Q96EH8 262 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 SLC47A1Q96FL8 570 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 ZDHHC12Q96GR4 267 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 SLC35A5Q9BS91 424 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 INPP5KQ9BT40 448 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 RAB33BQ9H082 229 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 SLC35C2Q9NQQ7 365 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 CALML5Q9NZT1 146 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 PDP2Q9P2J9 529 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 PLEKHM1Q9Y4G2 1056 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 SLC22A7Q9Y694 548 aa7.84□□□□□ -1.15
CHD4-208ENST00000540960 KRT87PA6NCN2 255 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 OR5K3A6NET4 321 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 A6NL46 340 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 A8MU76 341 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 B4DGG1 531 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 H0YAE9 185 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 NUDT21O43809 227 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 SERPINB7O75635 380 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 CEACAM4O75871 244 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 RASAL1O95294 804 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 STSP08842 583 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 UGT2B7P16662 529 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 HOXB9P17482 250 aaPredicted RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 DNAJA1P31689 397 aaKnown RBP7.83□□□□□ -1.16
CHD4-208ENST00000540960 KDELR2P33947 212 aa7.83□□□□□ -1.16
CHD4-208ENST00000540960 GPC1P35052 558 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms