RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 CSTF2P33240 577 aaKnown RBP eCLIP11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 BUD31P41223 144 aaPredicted RBP11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 KHKP50053 298 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 TPD52P55327 224 aaPredicted RBP11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 BTN3A2P78410 334 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 KCNC4Q03721 635 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 CEBPEQ15744 281 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 CLPPQ16740 277 aaPredicted RBP11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 ZIK1Q3SY52 487 aaPredicted RBP11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 IQCCQ4KMZ1 466 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 SNAP47Q5SQN1 464 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 ARHGAP40Q5TG30 622 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 ARMC6Q6NXE6 501 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 KLHL35Q6PF15 583 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 TMEM179BQ7Z7N9 219 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 GALNT10Q86SR1 603 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 HORMAD2Q8N7B1 307 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 AMER3Q8N944 861 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 SETD9Q8NE22 299 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 OR4D9Q8NGE8 314 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 UTP15Q8TED0 518 aaKnown RBP11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 NCSTNQ92542 709 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 TAMM41Q96BW9 452 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 SMIM10Q96HG1 83 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 SLC35G5Q96KT7 338 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 CCDC74BQ96LY2 380 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 MUS81Q96NY9 551 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 DPYSL5Q9BPU6 564 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 ZFYVE21Q9BQ24 234 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 ING2Q9H160 280 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 C3orf14Q9HBI5 128 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 P2RX2Q9UBL9 471 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 CES1P1Q9UKY3 287 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 BLOC1S6Q9UL45 172 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 FAM32AQ9Y421 112 aaKnown RBP11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 ATG4BQ9Y4P1 393 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 MAGED1Q9Y5V3 778 aaPredicted RBP11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 HSPE1-MOB4S4R3N1 261 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 U3KQV3 271 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 PTPRQQ9UMZ3 2332 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 IGSF10Q6WRI0 2623 aa11.22□□□□□ -0.61
CYB561A3-215ENST00000540317 LOC100130705A0A1B0GUX0 176 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 A8MU76 341 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 TMEM229AB2RXF0 380 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 DUX1O43812 170 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 B3GALT2O43825 422 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 PRAMEF10O60809 474 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 SERPINB7O75635 380 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 DNAJB5O75953 348 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 AIFM1O95831 613 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 FHP07954 510 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 TFPTP0C1Z6 253 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 ZNF888P0CJ79 500 aaPredicted RBP11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 NR2F6P10588 404 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 CCL4P13236 92 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 MAGP20916 626 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 CERS1P27544 350 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 RYKP34925 604 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 ETV5P41161 510 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 CDK9P50750 372 aaKnown RBP11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 RAB8AP61006 207 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 ESRRGP62508 458 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 PRR5P85299 388 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 CFHR1Q03591 330 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 KCNAB2Q13303 367 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 SQSTM1Q13501 440 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 SOWAHCQ53LP3 525 aaPredicted RBP11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 PRAMEF8Q5VWM4 474 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 PRAMEF7Q5VXH5 474 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 FOXB2Q5VYV0 432 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 KDM4DQ6B0I6 523 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 FCRL6Q6DN72 434 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 TMEM71Q6P5X7 295 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 KRT73Q86Y46 540 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 PIK3C3Q8NEB9 887 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 MIPOL1Q8TD10 442 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 SLC38A5Q8WUX1 472 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 HDAC2Q92769 488 aaKnown RBP11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 MBOAT4Q96T53 435 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 SPATA5L1Q9BVQ7 753 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 UCK1Q9HA47 277 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 LYRM4Q9HD34 91 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 HRASLS2Q9NWW9 162 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 NDUFAF4Q9P032 175 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 PDP1Q9P0J1 537 aaPredicted RBP11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 TMEM9Q9P0T7 183 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 C5AR2Q9P296 337 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 KIF17Q9P2E2 1029 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 TMEFF2Q9UIK5 374 aaPredicted RBP11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 FBXW2Q9UKT8 454 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 KLHL20Q9Y2M5 609 aa11.21□□□□□ -0.61
CYB561A3-215ENST00000540317 COL27A1Q8IZC6 1860 aaPredicted RBP11.21□□□□□ -0.62
CYB561A3-215ENST00000540317 SNRNP200O75643 2136 aaKnown RBP11.21□□□□□ -0.62
CYB561A3-215ENST00000540317 C4orf51C9J302 202 aa11.2□□□□□ -0.62
CYB561A3-215ENST00000540317 HMGN4O00479 90 aa11.2□□□□□ -0.62
CYB561A3-215ENST00000540317 PGRMC2O15173 223 aa11.2□□□□□ -0.62
CYB561A3-215ENST00000540317 EMC8O43402 210 aa11.2□□□□□ -0.62
CYB561A3-215ENST00000540317 ERAL1O75616 437 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms