RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 FAM92BQ6ZTR7 304 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 USP53Q70EK8 1073 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 NANOGNBQ7Z5D8 188 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 PLXDC1Q8IUK5 500 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 EID3Q8N140 333 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 MAGEE2Q8TD90 523 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 MUL1Q969V5 352 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 NEURL3Q96EH8 262 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 ZBED6CLQ96FA7 236 aaPredicted RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 ZDHHC12Q96GR4 267 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 TXNDC15Q96J42 360 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 ZNF285Q96NJ3 590 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 TGM7Q96PF1 710 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CD180Q99467 661 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 MAP3K3Q99759 626 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 SLC35A5Q9BS91 424 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 RBCK1Q9BYM8 510 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 NAA50Q9GZZ1 169 aaKnown RBP8.33□□□□□ -1.08
DDB1-213ENST00000539332 TPK1Q9H3S4 243 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 TMEM38AQ9H6F2 299 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 MAGIXQ9H6Y5 334 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 CXorf36Q9H7Y0 433 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 C1GALT1Q9NS00 363 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 SEMA4GQ9NTN9 838 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 KCMF1Q9P0J7 381 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 ATG4BQ9Y4P1 393 aa8.33□□□□□ -1.08
DDB1-213ENST00000539332 KIF26BQ2KJY2 2108 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 LOC105369274A0A096LPK9 316 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 LOC102723532A0A0G2JNH3 316 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 TLCD2A6NGC4 264 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 SLC9B1P1A6NJY1 282 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 MYO1GB0I1T2 1018 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 GSTA4O15217 222 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 FLRT2O43155 660 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 PIP5K1CO60331 668 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 MRPS14O60783 128 aaKnown RBP8.32□□□□□ -1.08
DDB1-213ENST00000539332 LRP3O75074 770 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 UGT2B11O75310 529 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 RAP2AP10114 183 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 THRBP10828 461 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 CRHBPP24387 322 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 CD40LGP29965 261 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 IDUAP35475 653 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 GABRA4P48169 554 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 RAB8AP61006 207 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 TNFRSF17Q02223 184 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 CFHR1Q03591 330 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 RBBP4Q09028 425 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 KCNJ8Q15842 424 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 CSRP2Q16527 193 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 NKG7Q16617 165 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 PRTGQ2VWP7 1150 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 XAF1Q6GPH4 301 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 ALKBH2Q6NS38 261 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 TMEM214Q6NUQ4 689 aaKnown RBP8.32□□□□□ -1.08
DDB1-213ENST00000539332 SLC48A1Q6P1K1 146 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 WDR74Q6RFH5 385 aaPredicted RBP8.32□□□□□ -1.08
DDB1-213ENST00000539332 TMEM64Q6YI46 380 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 OR4N4Q8N0Y3 316 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 CADM3Q8N126 398 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 CARFQ8N187 725 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 C19orf47Q8N9M1 422 aaKnown RBP8.32□□□□□ -1.08
DDB1-213ENST00000539332 ZNF555Q8NEP9 628 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 PHF10Q8WUB8 498 aaKnown RBP8.32□□□□□ -1.08
DDB1-213ENST00000539332 CHAC2Q8WUX2 184 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 FIG4Q92562 907 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 HPS1Q92902 700 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 TBC1D20Q96BZ9 403 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 C10orf90Q96M02 699 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 AMDHD1Q96NU7 426 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 CCDC3Q9BQI4 270 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 EDEM2Q9BV94 578 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 LHPPQ9H008 270 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 LYRM4Q9HD34 91 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 PARD6AQ9NPB6 346 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 SLC35C2Q9NQQ7 365 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 NCDNQ9UBB6 729 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 WARS2Q9UGM6 360 aaKnown RBP8.32□□□□□ -1.08
DDB1-213ENST00000539332 SLC22A7Q9Y694 548 aa8.32□□□□□ -1.08
DDB1-213ENST00000539332 MN1Q10571 1320 aaPredicted RBP8.32□□□□□ -1.08
DDB1-213ENST00000539332 IGHV5-51A0A0C4DH38 117 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 A0A1W2PQM1 296 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 CENPBD1B2RD01 187 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 TMX2-CTNND1H3BSU7 103 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 BCAS1O75363 584 aaPredicted RBP8.31□□□□□ -1.08
DDB1-213ENST00000539332 JRKO75564 520 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 GABARAPO95166 117 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 KRT75O95678 551 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 C9P02748 559 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 SEMG1P04279 462 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 ARAFP10398 606 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 CD59P13987 128 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 MAGEA2P43356 314 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 ALDH9A1P49189 494 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 DUSP3P51452 185 aaPredicted RBP8.31□□□□□ -1.08
DDB1-213ENST00000539332 CRYBA2P53672 197 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 RAD23AP54725 363 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 ARSFP54793 590 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 SQSTM1Q13501 440 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 FAM98BQ52LJ0 330 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms