RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 IGFBP1P08833 259 aaPredicted RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 SMIM10L1P0DMW3 83 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 DRD1P21728 446 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 HNRNPA2B1P22626 353 aaKnown RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 PTGER1P34995 402 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 BUD31P41223 144 aaPredicted RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 MC3RP41968 323 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 ENTPD8Q5MY95 495 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 OLIG3Q7RTU3 272 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 ZER1Q7Z7L7 766 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 ZNF554Q86TJ5 538 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 SAMD14Q8IZD0 417 aaPredicted RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 KBTBD8Q8NFY9 601 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 OR4K5Q8NGD3 323 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 OR9A2Q8NGT5 310 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 MCFD2Q8NI22 146 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 KLHL6Q8WZ60 621 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 TSACCQ96A04 125 aaPredicted RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 SMIM10Q96HG1 83 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 ARHGDIGQ99819 225 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 ACTRT3Q9BYD9 372 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 NXF2Q9GZY0 626 aaKnown RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 DNAAF2Q9NVR5 837 aaKnown RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 RHBDL2Q9NX52 303 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 GIN1Q9NXP7 522 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 RPL36Q9Y3U8 105 aaKnown RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 H0Y8X5 98 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 KPNA4O00629 521 aaPredicted RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 ADRA2AP08913 450 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 SLC35G6P0C7Q6 338 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 ZNF888P0CJ79 500 aaPredicted RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 GSTM3P21266 225 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 MMP11P24347 488 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 GRK5P34947 590 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 ACTR1BP42025 376 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 ACTR1AP61163 376 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 YPEL5P62699 121 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 RHAGQ02094 409 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 ZNF404Q494X3 552 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 GJD3Q8N144 294 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 CCL4L1Q8NHW4 92 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 GIMAP5Q96F15 307 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 OR2A14Q96R47 310 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 OR2A5Q96R48 311 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 MGLLQ99685 303 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 POLDIP3Q9BY77 421 aaKnown RBP16.84■□□□□ 0.29
GNE-204ENST00000539208 RACGAP1Q9H0H5 632 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 DSN1Q9H410 356 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 PHF11Q9UIL8 331 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 CA5BQ9Y2D0 317 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 NINQ8N4C6 2090 aa16.84■□□□□ 0.29
GNE-204ENST00000539208 METTL15A6NJ78 407 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 CSTF2P33240 577 aaKnown RBP eCLIP16.83■□□□□ 0.28
GNE-204ENST00000539208 DGKEP52429 567 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 TNFRSF17Q02223 184 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 DLX2Q07687 328 aaPredicted RBP16.83■□□□□ 0.28
GNE-204ENST00000539208 ZNF311Q5JNZ3 666 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 ATAD3BQ5T9A4 648 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 MFSD4BQ5TF39 518 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 RD3Q7Z3Z2 195 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 FAM26EQ8N5C1 309 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 AMER2Q8N7J2 671 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 ZFPM2Q8WW38 1151 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 SERINC2Q96SA4 455 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 MROQ9BYG7 248 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 TMEM168Q9H0V1 697 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 TRPV5Q9NQA5 729 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 TRNAU1APQ9NX07 287 aaKnown RBP16.83■□□□□ 0.28
GNE-204ENST00000539208 CCDC59Q9P031 241 aaKnown RBP16.83■□□□□ 0.28
GNE-204ENST00000539208 KCMF1Q9P0J7 381 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 ANKMY1Q9P2S6 941 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 MKLN1Q9UL63 735 aa16.83■□□□□ 0.28
GNE-204ENST00000539208 DUXAA6NLW8 204 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 ALPPP05187 535 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 ACSL1P33121 698 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 RELAQ04206 551 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 ATP1A4Q13733 1029 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 SUZ12Q15022 739 aaKnown RBP16.82■□□□□ 0.28
GNE-204ENST00000539208 TIMM50Q3ZCQ8 353 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 HEPHL1Q6MZM0 1159 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 TMEM80Q96HE8 168 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 OR5M11Q96RB7 305 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 URADA6NGE7 173 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 AGR2O95994 175 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 TNNI3P19429 210 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 PRKAR1BP31321 381 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 GIPRP48546 466 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 SRP54P61011 504 aaKnown RBP16.82■□□□□ 0.28
GNE-204ENST00000539208 CDK5Q00535 292 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 CHRNEQ04844 493 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 OXA1LQ15070 435 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 MED22Q15528 200 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 INAVAQ3KP66 663 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 PRRT3Q5FWE3 981 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 NIPAL1Q6NVV3 410 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 TUBA3EQ6PEY2 450 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 IQCHQ86VS3 1027 aa16.82■□□□□ 0.28
GNE-204ENST00000539208 LRRC25Q8N386 305 aaPredicted RBP16.82■□□□□ 0.28
GNE-204ENST00000539208 MINDY2Q8NBR6 621 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms