RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 FOXK1P85037 733 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 PGS1Q32NB8 556 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 LSM12Q3MHD2 195 aaKnown RBP16.49■□□□□ 0.23
DDX55-204ENST00000536079 RNFT1Q5M7Z0 435 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 ZNF324BQ6AW86 544 aaPredicted RBP16.49■□□□□ 0.23
DDX55-204ENST00000536079 NXNQ6DKJ4 435 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 R3HCC1LQ7Z5L2 792 aaKnown RBP16.49■□□□□ 0.23
DDX55-204ENST00000536079 SULF2Q8IWU5 870 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 LRRC34Q8IZ02 419 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 ACTRT2Q8TDY3 377 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 TP53INP1Q96A56 240 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 C5orf34Q96MH7 638 aa16.49■□□□□ 0.23
DDX55-204ENST00000536079 ACSS1Q9NUB1 689 aaPredicted RBP16.49■□□□□ 0.23
DDX55-204ENST00000536079 GPR55Q9Y2T6 319 aaPredicted RBP16.49■□□□□ 0.23
DDX55-204ENST00000536079 PRRC2CQ9Y520 2896 aaKnown RBP16.48■□□□□ 0.23
DDX55-204ENST00000536079 C6orf47O95873 294 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 CT45A8P0DMV1 189 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 CT45A9P0DMV2 189 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 MST1P26927 711 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 RFC3P40938 356 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 MANFP55145 182 aaKnown RBP16.48■□□□□ 0.23
DDX55-204ENST00000536079 FBXW4P57775 412 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 GPR85P60893 370 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 GUCY1A3Q02108 690 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 CT45A2Q5DJT8 189 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 HLA-DQA1Q5Y7H0 255 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 OR4F3Q6IEY1 312 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 SPATA19Q7Z5L4 167 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 CAMKMTQ7Z624 323 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 GPALPP1Q8IXQ4 340 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 CLECL1Q8IZS7 167 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 CPSF7Q8N684 471 aaKnown RBP16.48■□□□□ 0.23
DDX55-204ENST00000536079 SLC15A4Q8N697 577 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 OR10G3Q8NGC4 313 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 OR4N2Q8NGD1 307 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 OR5M3Q8NGP4 307 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 RFWD2Q8NHY2 731 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 SLC22A8Q8TCC7 542 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 ERP27Q96DN0 273 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 SPACA9Q96E40 222 aaPredicted RBP16.48■□□□□ 0.23
DDX55-204ENST00000536079 ZBED6CLQ96FA7 236 aaPredicted RBP16.48■□□□□ 0.23
DDX55-204ENST00000536079 DPY30Q9C005 99 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 PROK2Q9HC23 129 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 MED4Q9NPJ6 270 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 PCDHGB6Q9Y5F9 930 aa16.48■□□□□ 0.23
DDX55-204ENST00000536079 SHANK1Q9Y566 2161 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 A0A1W2PRB8 838 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 CDK2AP1O14519 115 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 EDF1O60869 148 aaKnown RBP16.47■□□□□ 0.23
DDX55-204ENST00000536079 SCN2BO60939 215 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 RASAL1O95294 804 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 DRD5P21918 477 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 ABCD3P28288 659 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 GPC1P35052 558 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 PPICP45877 212 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 ZFP36L2P47974 494 aaKnown RBP16.47■□□□□ 0.23
DDX55-204ENST00000536079 AQP5P55064 265 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 OPN5Q6U736 354 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 HORMAD2Q8N7B1 307 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 PSD4Q8NDX1 1056 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 C17orf47Q8NEP4 570 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 GIMAP5Q96F15 307 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 LCORQ96JN0 433 aaPredicted RBP16.47■□□□□ 0.23
DDX55-204ENST00000536079 BTBD9Q96Q07 612 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 DUSP26Q9BV47 211 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 CLMPQ9H6B4 373 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 CXorf36Q9H7Y0 433 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 DDX18Q9NVP1 670 aaKnown RBP16.47■□□□□ 0.23
DDX55-204ENST00000536079 PRODH2Q9UF12 536 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 NPFFR2Q9Y5X5 522 aa16.47■□□□□ 0.23
DDX55-204ENST00000536079 CHCHD2Q9Y6H1 151 aaPredicted RBP16.47■□□□□ 0.23
DDX55-204ENST00000536079 ASPDHA6ND91 283 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 FRG2CA6NGY1 282 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 PEX1O43933 1283 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 BCAS2O75934 225 aaPredicted RBP16.46■□□□□ 0.23
DDX55-204ENST00000536079 PIGAP37287 484 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 RPL3P39023 403 aaKnown RBP16.46■□□□□ 0.23
DDX55-204ENST00000536079 UQCRFS1P47985 274 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 DGKQP52824 942 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 PSG6Q00889 435 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 MLC1Q15049 377 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 HSP90B2PQ58FF3 399 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 SPANXN4Q5MJ08 99 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 BICRALQ6AI39 1079 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 RTL4Q6ZR62 310 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 FAR1Q8WVX9 515 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 C16orf58Q96GQ5 468 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 FRMD6Q96NE9 622 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 BHLHE41Q9C0J9 482 aaPredicted RBP16.46■□□□□ 0.23
DDX55-204ENST00000536079 NTMQ9P121 344 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 CNOT11Q9UKZ1 510 aaKnown RBP16.46■□□□□ 0.23
DDX55-204ENST00000536079 CFL2Q9Y281 166 aa16.46■□□□□ 0.23
DDX55-204ENST00000536079 E9PBE3 544 aa16.45■□□□□ 0.22
DDX55-204ENST00000536079 TO15178 435 aa16.45■□□□□ 0.22
DDX55-204ENST00000536079 ERN1O75460 977 aaKnown RBP16.45■□□□□ 0.22
DDX55-204ENST00000536079 SLITRK5O94991 958 aa16.45■□□□□ 0.22
DDX55-204ENST00000536079 C1QCP02747 245 aa16.45■□□□□ 0.22
DDX55-204ENST00000536079 ABCB1P08183 1280 aaPredicted RBP16.45■□□□□ 0.22
DDX55-204ENST00000536079 CD1EP15812 388 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms