RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	PRMT8	Q9NR22	394 aa	Predicted RBP	3.59	□□□□□ -1.83
PRKDC-205	ENST00000535375	COMMD8	Q9NX08	183 aa		3.59	□□□□□ -1.83
PRKDC-205	ENST00000535375	ERVK-18	Q9QC07	812 aa		3.59	□□□□□ -1.83
PRKDC-205	ENST00000535375	TEX264	Q9Y6I9	313 aa		3.59	□□□□□ -1.83
PRKDC-205	ENST00000535375	SPAG9	O60271	1321 aa	Known RBP	3.59	□□□□□ -1.83
PRKDC-205	ENST00000535375	FRG2C	A6NGY1	282 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	CYB561D2	O14569	222 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	DUSP14	O95147	198 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	SFTPB	P07988	381 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	ATP6V1E1	P36543	226 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	ARHGDIB	P52566	201 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	ZNF131	P52739	623 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	UCP2	P55851	309 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	RPS4X	P62701	263 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	CD47	Q08722	323 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	KLF5	Q13887	457 aa	Predicted RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	CCDC92	Q53HC0	331 aa	Predicted RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	PAN3	Q58A45	887 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	HERC4	Q5GLZ8	1057 aa	Predicted RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	MS4A13	Q5J8X5	152 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	ZNF658	Q5TYW1	1059 aa	Predicted RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	CDC42EP5	Q6NZY7	148 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375		Q6ZVH6	145 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	RABEPK	Q7Z6M1	372 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	ERICH1	Q86X53	443 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	APOBEC3F	Q8IUX4	373 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	STH	Q8IWL8	128 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	FBXO16	Q8IX29	292 aa	Predicted RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	CCDC47	Q96A33	483 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	SLCO4A1	Q96BD0	722 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	NUS1	Q96E22	293 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	C5orf30	Q96GV9	206 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	GPR174	Q9BXC1	333 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	KRTAP4-3	Q9BYR4	195 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	TSPYL1	Q9H0U9	437 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	TNMD	Q9H2S6	317 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	ACOXL	Q9NUZ1	547 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	FBXW2	Q9UKT8	454 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375	MOK	Q9UQ07	419 aa		3.58	□□□□□ -1.84
PRKDC-205	ENST00000535375		A0A0A6YYD4	124 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	EI24	O14681	340 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	SH2D1B	O14796	132 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	IGHV3-9	P01782	118 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	HMOX1	P09601	288 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375		P0C879	139 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	CD1E	P15812	388 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	P2RY4	P51582	365 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	BPIFB3	P59826	476 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	HERV-K104	P63124	156 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	CBX3	Q13185	183 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	ASAH1	Q13510	395 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	GK2	Q14410	553 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	QRICH1	Q2TAL8	776 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	PARP10	Q53GL7	1025 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	C9orf129	Q5T035	196 aa	Known RBP	3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	PSMA8	Q8TAA3	256 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	MRPL53	Q96EL3	112 aa	Known RBP	3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	C9orf85	Q96MD7	179 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	THAP9	Q9H5L6	903 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	ZCCHC3	Q9NUD5	404 aa	Known RBP	3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	IL19	Q9UHD0	177 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	MAD2L2	Q9UI95	211 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	ABCG2	Q9UNQ0	655 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	PLEKHA6	Q9Y2H5	1048 aa		3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	MTF2	Q9Y483	593 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	KLF2	Q9Y5W3	355 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKDC-205	ENST00000535375	CHEK1	O14757	476 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	BCAS2	O75934	225 aa	Predicted RBP	3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	NT5C2	P49902	561 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	SMS	P52788	366 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	SERTAD2	Q14140	314 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	HKDC1	Q2TB90	917 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	SEL1L2	Q5TEA6	688 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	RAB12	Q6IQ22	244 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	CNST	Q6PJW8	725 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	ZNF410	Q86VK4	478 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	PEX5L	Q8IYB4	626 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	OR2L5	Q8NG80	312 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	OR4A16	Q8NH70	328 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	U2AF1L4	Q8WU68	220 aa	Known RBP	3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	EEF2KMT	Q96G04	330 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	SPX	Q9BT56	116 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	IKZF5	Q9H5V7	419 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	NRN1	Q9NPD7	142 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	ESM1	Q9NQ30	184 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	KLRF1	Q9NZS2	232 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	AKAP7	Q9P0M2	348 aa	Predicted RBP	3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	HMG20B	Q9P0W2	317 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	DPM3	Q9P2X0	92 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	KLHL21	Q9UJP4	597 aa		3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	FOXA2	Q9Y261	457 aa	Predicted RBP	3.56	□□□□□ -1.84
PRKDC-205	ENST00000535375	DHX29	Q7Z478	1369 aa	Known RBP	3.55	□□□□□ -1.84
PRKDC-205	ENST00000535375	NPIPA5	A0A0B4J1W7	369 aa		3.55	□□□□□ -1.84
PRKDC-205	ENST00000535375	EPOP	A6NHQ4	379 aa		3.55	□□□□□ -1.84
PRKDC-205	ENST00000535375	SLC9B1P1	A6NJY1	282 aa		3.55	□□□□□ -1.84
PRKDC-205	ENST00000535375	NPIPA5	E9PKD4	350 aa		3.55	□□□□□ -1.84
PRKDC-205	ENST00000535375	RTL8C	O15255	209 aa		3.55	□□□□□ -1.84
PRKDC-205	ENST00000535375	CFLAR	O15519	480 aa		3.55	□□□□□ -1.84
PRKDC-205	ENST00000535375	LCMT2	O60294	686 aa	Known RBP	3.55	□□□□□ -1.84
PRKDC-205	ENST00000535375	ATP6V1G1	O75348	118 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms