RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 PRODH2Q9UF12 536 aa12.14□□□□□ -0.47
TMEM258-202ENST00000535042 YARS2Q9Y2Z4 477 aaKnown RBP12.14□□□□□ -0.47
TMEM258-202ENST00000535042 HEMK1Q9Y5R4 338 aaPredicted RBP12.14□□□□□ -0.47
TMEM258-202ENST00000535042 DYTNA2CJ06 578 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 FAM234BA2RU67 622 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 FCHO1O14526 889 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 CFLARO15519 480 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 EMC8O43402 210 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 NEURL1O76050 574 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 CPSF4O95639 269 aaKnown RBP12.13□□□□□ -0.47
TMEM258-202ENST00000535042 C1QCP02747 245 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 PRB1P04280 392 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 SOX3P41225 446 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 PPICP45877 212 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 TNFSF10P50591 281 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 HLCSP50747 726 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 SSR4P51571 173 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 PRKAG1P54619 331 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 CORO7P57737 925 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 OC90Q02509 493 aaPredicted RBP12.13□□□□□ -0.47
TMEM258-202ENST00000535042 PLEKHN1Q494U1 663 aaPredicted RBP12.13□□□□□ -0.47
TMEM258-202ENST00000535042 ANXA8L1Q5VT79 327 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 METTL21CQ5VZV1 264 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 HLA-DQA1Q5Y7H0 255 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 SLC6A19Q695T7 634 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 SPINK14Q6IE38 97 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 NPSR1Q6W5P4 371 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 Q6ZS92 163 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 HPS6Q86YV9 775 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 CLEC4FQ8N1N0 589 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 MDS2Q8NDY4 140 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 NUP43Q8NFH3 380 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 TM9SF4Q92544 642 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 TP53INP1Q96A56 240 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 VPS33AQ96AX1 596 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 C16orf58Q96GQ5 468 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 OR52E6Q96RD3 313 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 UTP23Q9BRU9 249 aaKnown RBP12.13□□□□□ -0.47
TMEM258-202ENST00000535042 FAM107BQ9H098 131 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 RABEP2Q9H5N1 569 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 TRIM45Q9H8W5 580 aaPredicted RBP12.13□□□□□ -0.47
TMEM258-202ENST00000535042 SLC52A3Q9NQ40 469 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 ZCCHC3Q9NUD5 404 aaKnown RBP12.13□□□□□ -0.47
TMEM258-202ENST00000535042 FAM120CQ9NX05 1096 aaKnown RBP12.13□□□□□ -0.47
TMEM258-202ENST00000535042 TAS2R9Q9NYW1 312 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 CCDC167Q9P0B6 97 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 LUZP4Q9P127 313 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 ABI3Q9P2A4 366 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 BTNL2Q9UIR0 455 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 CFL2Q9Y281 166 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 GPR55Q9Y2T6 319 aaPredicted RBP12.13□□□□□ -0.47
TMEM258-202ENST00000535042 SNX8Q9Y5X2 465 aa12.13□□□□□ -0.47
TMEM258-202ENST00000535042 CROCCQ5TZA2 2017 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 COQ9O75208 318 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 ERN1O75460 977 aaKnown RBP12.12□□□□□ -0.47
TMEM258-202ENST00000535042 IL6P05231 212 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 CT45A8P0DMV1 189 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 CT45A9P0DMV2 189 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 DRD5P21918 477 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 MAP3K8P41279 467 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 CDKN2CP42773 168 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 CCT3P49368 545 aaKnown RBP12.12□□□□□ -0.47
TMEM258-202ENST00000535042 PSG6Q00889 435 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 ZNF155Q12901 538 aaPredicted RBP12.12□□□□□ -0.47
TMEM258-202ENST00000535042 NFATC3Q12968 1075 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 OR1C1Q15619 314 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 ZNF791Q3KP31 576 aaPredicted RBP12.12□□□□□ -0.47
TMEM258-202ENST00000535042 TIGD2Q4W5G0 525 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 AGKQ53H12 422 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 CT45A2Q5DJT8 189 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 IL20RBQ6UXL0 311 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 SPATA21Q7Z572 469 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 PRR22Q8IZ63 422 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 TMEM156Q8N614 296 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 CPSF7Q8N684 471 aaKnown RBP12.12□□□□□ -0.47
TMEM258-202ENST00000535042 Q8NA96 180 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 C17orf47Q8NEP4 570 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 VPS37AQ8NEZ2 397 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 OR4A15Q8NGL6 344 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 OR5AK3PQ8NH89 298 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 ASB15Q8WXK1 588 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 HOXB13Q92826 284 aaPredicted RBP12.12□□□□□ -0.47
TMEM258-202ENST00000535042 LCORQ96JN0 433 aaPredicted RBP12.12□□□□□ -0.47
TMEM258-202ENST00000535042 CCDC115Q96NT0 180 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 BTBD9Q96Q07 612 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 HES7Q9BYE0 225 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.12□□□□□ -0.47
TMEM258-202ENST00000535042 C3orf14Q9HBI5 128 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 EQTNQ9NQ60 294 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 SERHLQ9NQF3 203 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 SAR1AQ9NR31 198 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 LRFN1Q9P244 771 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 TRIM33Q9UPN9 1127 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 ZFYVE26Q68DK2 2539 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 ATRXP46100 2492 aa12.12□□□□□ -0.47
TMEM258-202ENST00000535042 ASPDHA6ND91 283 aa12.11□□□□□ -0.47
TMEM258-202ENST00000535042 FRG2CA6NGY1 282 aa12.11□□□□□ -0.47
TMEM258-202ENST00000535042 NR5A2O00482 541 aa12.11□□□□□ -0.47
TMEM258-202ENST00000535042 TO15178 435 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms