RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SYT16Q17RD7 645 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 C18orf63Q68DL7 685 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 GTF2IRD2BQ6EKJ0 949 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 C6orf15Q6UXA7 325 aaPredicted RBP11.54□□□□□ -0.56
SCARB1-204ENST00000535005 R3HCC1LQ7Z5L2 792 aaKnown RBP11.54□□□□□ -0.56
SCARB1-204ENST00000535005 CAMKMTQ7Z624 323 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 GTF2IRD2Q86UP8 949 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 POP5Q969H6 163 aaKnown RBP11.54□□□□□ -0.56
SCARB1-204ENST00000535005 TBC1D20Q96BZ9 403 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 COQ8BQ96D53 544 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 TEX37Q96LM6 180 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 ALPK1Q96QP1 1244 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 FAM117AQ9C073 453 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 CLMPQ9H6B4 373 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 ASCL3Q9NQ33 180 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 FOXJ2Q9P0K8 574 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 TRPC4Q9UBN4 977 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 CES1P1Q9UKY3 287 aa11.54□□□□□ -0.56
SCARB1-204ENST00000535005 TCRBV5S2A0A599 114 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 FAM234BA2RU67 622 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 VSTM2BA6NLU5 285 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 GABRR3A8MPY1 467 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 FHP07954 510 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF182P17025 639 aaPredicted RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 DDX5P17844 614 aaKnown RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 IL12AP29459 219 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 ID4P47928 161 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 ZFP36L2P47974 494 aaKnown RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 SERPINB10P48595 397 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 SRSF11Q05519 484 aaKnown RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 UGT8Q16880 541 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 DPY19L1Q2PZI1 675 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 TTC23Q5W5X9 447 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 SLC48A1Q6P1K1 146 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 MRPL14Q6P1L8 145 aaKnown RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 TIPARPQ7Z3E1 657 aaKnown RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 FUNDC1Q8IVP5 155 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 ZC3H7AQ8IWR0 971 aaKnown RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF595Q8IYB9 648 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 KRTCAP2Q8N6L1 136 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 GALNT6Q8NCL4 622 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 CDC26Q8NHZ8 85 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 AURKBQ96GD4 344 aaPredicted RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 PEX11GQ96HA9 241 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 FBXL20Q96IG2 436 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 CSF3RQ99062 836 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 ZBTB18Q99592 522 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 LANCL2Q9NS86 450 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 ZNF282Q9UDV7 671 aaPredicted RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 DAPK2Q9UIK4 370 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 PADI1Q9ULC6 663 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 MRPS33Q9Y291 106 aaKnown RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 SPTBN2O15020 2390 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 FER1L5A0AVI2 2057 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 FAM227AF5H4B4 570 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 FXYD1O00168 92 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 PGRMC2O15173 223 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 PRSS23O95084 383 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 LRATO95237 230 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 CD63P08962 238 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 CCNYL3P0C7X3 344 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 SLC6A2P23975 617 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 HTR1EP28566 365 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 HOXD11P31277 338 aaPredicted RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 XCR1P46094 333 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 FOXC1Q12948 553 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 ITGADQ13349 1161 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 NEDD8Q15843 81 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 INAQ16352 499 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 LCN10Q6JVE6 187 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 BLOC1S3Q6QNY0 202 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 SPPL2CQ8IUH8 684 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 SHISA5Q8N114 240 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 MMP21Q8N119 569 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 ESX1Q8N693 406 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 NATD1Q8N6N6 113 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 TMCO5AQ8N6Q1 288 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 C7orf57Q8NEG2 295 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 OR8J2Q8NGG1 315 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 OR9I1Q8NGQ6 314 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 DNAJB14Q8TBM8 379 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 MR1Q95460 341 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 UCN3Q969E3 161 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 LRRC58Q96CX6 371 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 SH3YL1Q96HL8 342 aaPredicted RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 YIPF2Q9BWQ6 316 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 CHST8Q9H2A9 424 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 RMND5AQ9H871 391 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 WDR54Q9H977 334 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 AKIRIN1Q9H9L7 192 aaPredicted RBP11.53□□□□□ -0.56
SCARB1-204ENST00000535005 AKIP1Q9NQ31 210 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 MIEF1Q9NQG6 463 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 C14orf105Q9NVL8 296 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 MAP10Q9P2G4 905 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 MMACHCQ9Y4U1 282 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 NEUROG3Q9Y4Z2 214 aa11.53□□□□□ -0.56
SCARB1-204ENST00000535005 NR5A2O00482 541 aa11.52□□□□□ -0.57
SCARB1-204ENST00000535005 CLDN4O14493 209 aa11.52□□□□□ -0.57
SCARB1-204ENST00000535005 CTNSO60931 367 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms