RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 KCNK10P57789 538 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ACTBP60709 375 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 CXCR4P61073 352 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ACTA2P62736 377 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ACTG1P63261 375 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ACTG2P63267 376 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ACTC1P68032 377 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ACTA1P68133 377 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 TNFRSF9Q07011 255 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 MERTKQ12866 999 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 IL24Q13007 206 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 MAPK7Q13164 816 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 BAATQ14032 418 aaPredicted RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 CALCRLQ16602 461 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 CYP1B1Q16678 543 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 FAM187BQ17R55 369 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 RFX4Q33E94 735 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ACER2Q5QJU3 275 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ARL6IP4Q66PJ3 421 aaKnown RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 CYB5RLQ6IPT4 315 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 LRRN1Q6UXK5 716 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 TMIGD1Q6UXZ0 262 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 SPNS3Q6ZMD2 512 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 TMEM26Q6ZUK4 368 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 MED25Q71SY5 747 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 G2E3Q7L622 706 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ABHD12BQ7Z5M8 362 aaPredicted RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 PRRT2Q7Z6L0 340 aaPredicted RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 METTL23Q86XA0 190 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 APCDD1Q8J025 514 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ARRDC1Q8N5I2 433 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 BHLHE23Q8NDY6 225 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 SEMA6DQ8NFY4 1073 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 OR7A2PQ8NGA2 310 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 OR13J1Q8NGT2 312 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 IL31RAQ8NI17 732 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 PIH1D2Q8WWB5 315 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 TM4SF18Q96CE8 201 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 CDKN2AIPNLQ96HQ2 116 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 PPP1R36Q96LQ0 422 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 RNF157Q96PX1 679 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 EBNA1BP2Q99848 306 aaKnown RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 PKP2Q99959 881 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 C1QTNF3Q9BXJ4 246 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 B3GNT5Q9BYG0 378 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 NLNQ9BYT8 704 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 MAGEB5Q9BZ81 275 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 RNPEPQ9H4A4 650 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ZNF768Q9H5H4 540 aaKnown RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 KCNK9Q9NPC2 374 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 SLAMF7Q9NQ25 335 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 DYRK4Q9NR20 520 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 EIF2B3Q9NR50 452 aaKnown RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 TBC1D13Q9NVG8 400 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 NLE1Q9NVX2 485 aaPredicted RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 FBXL12Q9NXK8 326 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 TAB2Q9NYJ8 693 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 RDH8Q9NYR8 311 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 GTSE1Q9NYZ3 720 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 LRWD1Q9UFC0 647 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 ARMCX3Q9UH62 379 aaPredicted RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 ING4Q9UNL4 249 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 FAM50BQ9Y247 325 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 PADI2Q9Y2J8 665 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 TMEM184BQ9Y519 407 aaPredicted RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 VWDEQ8N2E2 1590 aa5.2□□□□□ -1.58
CD44-236ENST00000533222 MYH14Q7Z406 1995 aaKnown RBP5.2□□□□□ -1.58
CD44-236ENST00000533222 KIF13BQ9NQT8 1826 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 A0A075B6Q4 140 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 A0A1B0GVI7 797 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 PLSCR5A0PG75 271 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 PGPEP1LA6NFU8 196 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 A8MV72 311 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 ARHGEF33A8MVX0 844 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 FOXO6A8MYZ6 492 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 ANHXE9PGG2 379 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 H3BML4 177 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 TEX46H3BTG2 121 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 M0QYT0 321 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 M0R3G1 203 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 GRM8O00222 908 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 SIGLEC5O15389 551 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 HCN1O60741 890 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CREG1O75629 220 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 BCAS2O75934 225 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 LATS1O95835 1130 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 AK1P00568 194 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 PIGRP01833 764 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 RLN2P04090 185 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 PCCAP05165 728 aaPredicted RBP5.19□□□□□ -1.58
CD44-236ENST00000533222 TSPAN19P0C672 248 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 NBEAP1P0C6P0 100 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 DHRS4L1P0CG22 281 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 G6PDP11413 515 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 CKMT1AP12532 417 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 TYRP14679 529 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 MYOGP15173 224 aa5.19□□□□□ -1.58
CD44-236ENST00000533222 FPR3P25089 353 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms