RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 SNTNA6NMZ2 147 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 LRRTM2O43300 516 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 CHP2O43745 196 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 SGTAO43765 313 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 SH3BP5O60239 455 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 TSC22D2O75157 780 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 NME6O75414 186 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-224ENST00000533129 BCHEP06276 602 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 GJA1P17302 382 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 IMPA1P29218 277 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 SLC6A1P30531 599 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 SPINT3P49223 89 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 ATP12AP54707 1039 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 RGS1Q08116 209 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 MPPE1Q53F39 396 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 ZNF57Q68EA5 555 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-224ENST00000533129 DEF8Q6ZN54 512 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 UCN3Q969E3 161 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 ECHDC3Q96DC8 303 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 ZNF354BQ96LW1 612 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 SLC46A2Q9BY10 475 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 PTTG3PQ9NZH4 202 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 NCKAP1Q9Y2A7 1128 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 KCNE2Q9Y6J6 123 aa13.97□□□□□ -0.17
CAPN1-224ENST00000533129 LEFTY2O00292 366 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 BTN3A3O00478 584 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 ZNF197O14709 1029 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 PRODHO43272 600 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 CATP04040 527 aaKnown RBP13.96□□□□□ -0.17
CAPN1-224ENST00000533129 AVPR1BP47901 424 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 GIPRP48546 466 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 AGFG1P52594 562 aaKnown RBP13.96□□□□□ -0.17
CAPN1-224ENST00000533129 TAS2R50P59544 299 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 CDK5Q00535 292 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 PRSS53Q2L4Q9 553 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 FAM205BPQ63HN1 556 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 TMPRSS11BQ86T26 416 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 ARIH2OSQ8N7S6 290 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 ZNF680Q8NEM1 530 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 WDR48Q8TAF3 677 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 NEIL2Q969S2 332 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 VOPP1Q96AW1 172 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 CHFRQ96EP1 664 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 RNFT2Q96EX2 444 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 SENP5Q96HI0 755 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-224ENST00000533129 RANBP3Q9H6Z4 567 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-224ENST00000533129 DMRT3Q9NQL9 472 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 ICKQ9UPZ9 632 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 KLHL18O94889 574 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 SLC16A8O95907 504 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 HNRNPA1P09651 372 aaKnown RBP eCLIP13.96□□□□□ -0.17
CAPN1-224ENST00000533129 CCSMST1Q4G0I0 132 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 ARHGAP15Q53QZ3 475 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 TYW3Q6IPR3 259 aaKnown RBP13.96□□□□□ -0.17
CAPN1-224ENST00000533129 IKBIPQ70UQ0 350 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 LRRC17Q8N6Y2 441 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 ZNF431Q8TF32 576 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-224ENST00000533129 NEURL3Q96EH8 262 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 TMEM19Q96HH6 336 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 WACQ9BTA9 647 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 RSPO3Q9BXY4 272 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-224ENST00000533129 SPNS1Q9H2V7 528 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 CXorf36Q9H7Y0 433 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 EMC7Q9NPA0 242 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 HCFC1R1Q9NWW0 138 aa13.96□□□□□ -0.17
CAPN1-224ENST00000533129 NINQ8N4C6 2090 aa13.96□□□□□ -0.18
CAPN1-224ENST00000533129 NRG2O14511 850 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-224ENST00000533129 GRM6O15303 877 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 MTX2O75431 263 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 TPOP07202 933 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 CCR2P41597 374 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 KCNJ5P48544 419 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 SMSP52788 366 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 ACSM5Q6NUN0 579 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 SLC36A4Q6YBV0 504 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 HDDC2Q7Z4H3 204 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 LINC00471Q8N535 108 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 HORMAD2Q8N7B1 307 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 ZNF485Q8NCK3 441 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 MED28Q9H204 178 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 PPIL3Q9H2H8 161 aaKnown RBP13.95□□□□□ -0.18
CAPN1-224ENST00000533129 POLHQ9Y253 713 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 DNMT3AQ9Y6K1 912 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-224ENST00000533129 DOCK6Q96HP0 2047 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 A0A0A6YYJ9 748 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 A0A1W2PRQ8 180 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 OR7A10O76100 309 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 LIMS3P0CW19 117 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 LIMS4P0CW20 117 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 CAMK1Q14012 370 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 GPR176Q14439 515 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 FCN2Q15485 313 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 MINDY4Q4G0A6 757 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 PLA1AQ53H76 456 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 RBM45Q8IUH3 476 aaKnown RBP13.95□□□□□ -0.18
CAPN1-224ENST00000533129 GRAMD2AQ8IUY3 354 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 OTULINQ96BN8 352 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 WDR34Q96EX3 536 aa13.95□□□□□ -0.18
CAPN1-224ENST00000533129 UBL7Q96S82 380 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-224ENST00000533129 SLC6A16Q9GZN6 736 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms