RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 EURLQ9NYK6 297 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 NKX1-2Q9UD57 310 aaPredicted RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 NXT1Q9UKK6 140 aaKnown RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 GOLGA4Q13439 2230 aaKnown RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 ABCA3Q99758 1704 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 C17orf113A0A1B0GUU1 675 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 SH3PXD2BA1X283 911 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 ZNF878C9JN71 531 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 PPM1BO75688 479 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 ZFAND5O76080 213 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 HCKP08631 526 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 CDH15P55291 814 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 TUBA3CQ13748 450 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 C18orf21Q32NC0 220 aaPredicted RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 GALNT15Q8N3T1 639 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 FAM129BQ96TA1 746 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 FBXO9Q9UK97 447 aaPredicted RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 H3BUI4 141 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 UGDHO60701 494 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 CBFBQ13951 182 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 GINS1Q14691 196 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 ATP6AP1Q15904 470 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 NADK2Q4G0N4 442 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 ZNF782Q6ZMW2 699 aaPredicted RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 SPATC1Q76KD6 591 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 COMMD6Q7Z4G1 85 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 PDSS2Q86YH6 399 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 TEX19Q8NA77 164 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 ARRDC2Q8TBH0 407 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 PCDHB16Q9NRJ7 776 aa10.72□□□□□ -0.69
PTPRK-221ENST00000532331 PTBP2Q9UKA9 531 aaKnown RBP10.72□□□□□ -0.69
PTPRK-221ENST00000532331 EDIL3O43854 480 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 ADORA3P0DMS8 318 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 PDHA2P29803 388 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 MMP12P39900 470 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 IER5LQ5T953 404 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 RPL13AP3Q6NVV1 102 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 ULK3Q6PHR2 472 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 STX12Q86Y82 276 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 TOMM5Q8N4H5 51 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 NANOS1Q8WY41 292 aaKnown RBP10.71□□□□□ -0.69
PTPRK-221ENST00000532331 PIP5K1AQ99755 562 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 TTYH2Q9BSA4 534 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 PROM1O43490 865 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 S100A9P06702 114 aaKnown RBP10.71□□□□□ -0.69
PTPRK-221ENST00000532331 PEPDP12955 493 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 CDHR3Q6ZTQ4 885 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 PIANPQ8IYJ0 282 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 DNAJA3Q96EY1 480 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 THSD1Q9NS62 852 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 MCTS1Q9ULC4 181 aaKnown RBP10.71□□□□□ -0.69
PTPRK-221ENST00000532331 SCAMP2O15127 329 aaKnown RBP10.71□□□□□ -0.69
PTPRK-221ENST00000532331 CLDN8P56748 225 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 KIAA1024LP59773 190 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 GPLD1P80108 840 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 HTRA4P83105 476 aaPredicted RBP10.71□□□□□ -0.69
PTPRK-221ENST00000532331 C4orf46Q504U0 113 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 THOC7Q6I9Y2 204 aaKnown RBP10.71□□□□□ -0.69
PTPRK-221ENST00000532331 OPN5Q6U736 354 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 OR5K2Q8NHB8 316 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 RHBDF1Q96CC6 855 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 KLHL42Q9P2K6 505 aa10.71□□□□□ -0.69
PTPRK-221ENST00000532331 C5orf51A6NDU8 294 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 TTLL8A6PVC2 850 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 SCGNO76038 276 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 C1orf105O95561 183 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 UGT2B7P16662 529 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 SLC15A1P46059 708 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 CCL11P51671 97 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 CCR5P51681 352 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 KANK2Q63ZY3 851 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 PLCZ1Q86YW0 608 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF283Q8N7M2 679 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 MINDY2Q8NBR6 621 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 OR2L8Q8NGY9 312 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 FBXL20Q96IG2 436 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 SACM1LQ9NTJ5 587 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 BOKQ9UMX3 212 aaPredicted RBP10.71□□□□□ -0.7
PTPRK-221ENST00000532331 DOCK2Q92608 1830 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 HTR3EA5X5Y0 456 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 CDRT1O95170 752 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 CSN2P05814 226 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 CNR2P34972 360 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 OR1D4P47884 311 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 SIX1Q15475 284 aaPredicted RBP10.71□□□□□ -0.7
PTPRK-221ENST00000532331 LRIT3Q3SXY7 679 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 OR52B6Q8NGF0 335 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 CREB3L4Q8TEY5 395 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 L3HYPDHQ96EM0 354 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 UTP23Q9BRU9 249 aaKnown RBP10.71□□□□□ -0.7
PTPRK-221ENST00000532331 SEC14L4Q9UDX3 406 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 USP54Q70EL1 1684 aa10.71□□□□□ -0.7
PTPRK-221ENST00000532331 LRP5O75197 1615 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 UNC119BA6NIH7 251 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 CCR7P32248 378 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 OR1D5P58170 312 aa10.7□□□□□ -0.7
PTPRK-221ENST00000532331 UGT3A2Q3SY77 523 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms