RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 FZR1Q9UM11 496 aa2.47□□□□□ -2.01
CD44-234ENST00000531873 NIP7Q9Y221 180 aaKnown RBP eCLIP2.47□□□□□ -2.01
CD44-234ENST00000531873 SYNJ2O15056 1496 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 AFF2P51816 1311 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 PRR23AA6NEV1 266 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 IGLON5A6NGN9 336 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ASB14A6NK59 587 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ARHGEF33A8MVX0 844 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 H0YCG3 227 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 TRAFD1O14545 582 aaPredicted RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 CYB561D2O14569 222 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 IDH1O75874 414 aaKnown RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 NEBLO76041 1014 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 UFL1O94874 794 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ECDO95905 644 aaPredicted RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 IGHG1P01857 330 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 OR9G9P0C7N8 305 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 PRG2P13727 222 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 UCP1P25874 307 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 HTR2AP28223 471 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 CA8P35219 290 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 HTR5AP47898 357 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 GBX2P52951 348 aaPredicted RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 RAG2P55895 527 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ACTR1AP61163 376 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 HAND2P61296 217 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ERVK-16P61578 105 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 MRPS6P82932 125 aaKnown RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 ZNF85Q03923 595 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 CHIT1Q13231 466 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 TFDP1Q14186 410 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 FASTKQ14296 549 aaKnown RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 CCL14Q16627 93 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ECSCRQ19T08 205 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 MAJINQ3KP22 176 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 DCAF4L1Q3SXM0 396 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 POM121L1PQ3SYA9 428 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 MOGAT2Q3SYC2 334 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 WLSQ5T9L3 541 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 PNCKQ6P2M8 343 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 CASC1Q6TDU7 716 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 KDELC1Q6UW63 502 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ZNF841Q6ZN19 808 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 RGS9BPQ6ZS82 235 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 MOB2Q70IA6 237 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 LPCAT2Q7L5N7 544 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 P4HA3Q7Z4N8 544 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 VASH2Q86V25 355 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ZFAND4Q86XD8 727 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 CCDC71Q8IV32 467 aaPredicted RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 ZNF614Q8N883 585 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ZNF491Q8N8L2 437 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 NUP37Q8NFH4 326 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 OR5AU1Q8NGC0 362 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 OR2T3Q8NH03 318 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 OR2T6Q8NHC8 308 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 SPPL2AQ8TCT8 520 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 PCNPQ8WW12 178 aaKnown RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 LHX4Q969G2 390 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 BIRC7Q96CA5 298 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 FBXO17Q96EF6 278 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ART5Q96L15 291 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 PRICKLE1Q96MT3 831 aaPredicted RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 SYT15Q9BQS2 421 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 TBCDQ9BTW9 1192 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ZSCAN5AQ9BUG6 496 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 RBM4Q9BWF3 364 aaKnown RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 GPR174Q9BXC1 333 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 POLR1EQ9GZS1 481 aaKnown RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 RPAP3Q9H6T3 665 aaPredicted RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 GPN2Q9H9Y4 310 aaPredicted RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 MEAF6Q9HAF1 191 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 FARSBQ9NSD9 589 aaKnown RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 DEPPQ9NTK1 212 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 BARHL2Q9NY43 387 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 EXTL2Q9UBQ6 330 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ASIC3Q9UHC3 531 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 ZNF346Q9UL40 294 aaKnown RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 EMCNQ9ULC0 261 aa2.46□□□□□ -2.02
CD44-234ENST00000531873 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.46□□□□□ -2.02
CD44-234ENST00000531873 EXOGQ9Y2C4 368 aaKnown RBP2.46□□□□□ -2.02
CD44-234ENST00000531873 CNTNAP2Q9UHC6 1331 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 IGHV4-30-2A0A087WSY4 118 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 IQCMA0A1B0GVH7 501 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 TTC26A0AVF1 554 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 ESYT2A0FGR8 921 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 LRIT2A6NDA9 550 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 WASHC1A8K0Z3 465 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 GPR89AB7ZAQ6 455 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 WASH3PC4AMC7 463 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 H3BTX0 84 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 CTAGE5O15320 804 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 CFLARO15519 480 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 EDIL3O43854 480 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 RANBP6O60518 1105 aaKnown RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 TBX19O60806 448 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 SDC3O75056 442 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 TM7SF2O76062 418 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 MFN2O95140 757 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms