RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 MBD3L3A6NE82 208 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 TUBAL3A6NHL2 446 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 ANKDD1BA6NHY2 528 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 MBD3L5A6NJ08 208 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 CLCA1A8K7I4 914 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 FAM171A2A8MVW0 826 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 FAM47E-STBD1D6RA91 191 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 CCDC22O60826 627 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 SNNO75324 88 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 BPGMP07738 259 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 T-ENOLP0DO92 83 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 EPXP11678 715 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 NEFHP12036 1026 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 BGNP21810 368 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 HIST1H1TP22492 207 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 TIMP3P35625 211 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 PEX19P40855 299 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 MAGEA12P43365 314 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 KCNC1P48547 511 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 HSPA7P48741 367 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 CCNG1P51959 295 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 SLC37A1P57057 533 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 DCAF7P61962 342 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 FOXF2Q12947 444 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 SERTAD2Q14140 314 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 KEAP1Q14145 624 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 EBPQ15125 230 aaKnown RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 OR4D1Q15615 310 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 C18orf63Q68DL7 685 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 VASNQ6EMK4 673 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 ADAMTSL2Q86TH1 951 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 LACC1Q8IV20 430 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 KRT78Q8N1N4 520 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 ARHGAP24Q8N264 748 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 VWA5B2Q8N398 1253 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 NKAPQ8N5F7 415 aaKnown RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 C9orf106Q8NAJ2 232 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 FAM13CQ8NE31 585 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 RFWD2Q8NHY2 731 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 MBD3L2Q8NHZ7 208 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 UTP4Q969X6 686 aaKnown RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 PTCD3Q96EY7 689 aaKnown RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 FBXL20Q96IG2 436 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 KCNC2Q96PR1 638 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 CPNE1Q99829 537 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 ZNF717Q9BY31 904 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 PITHD1Q9GZP4 211 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 WWTR1Q9GZV5 400 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 COPS7BQ9H9Q2 264 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 CAB39LQ9H9S4 337 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 DNAJC11Q9NVH1 559 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 QPCTLQ9NXS2 382 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 NSMCE4AQ9NXX6 385 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 GPRC5BQ9NZH0 403 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 COPS7AQ9UBW8 275 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 ZNF629Q9UEG4 869 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 BOKQ9UMX3 212 aaPredicted RBP8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 C15orf41Q9Y2V0 281 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 SLC6A5Q9Y345 797 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 USF3Q68DE3 2245 aa8.41□□□□□ -1.06
CHMP4A-205ENST00000531158 A0A088AWK7 358 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 A0A0G2JND7 137 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 HMX2A2RU54 273 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 WDR91A4D1P6 747 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 SYNDIG1LA6NDD5 238 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 AHRRA9YTQ3 701 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 SIAH2O43255 324 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 H2AFYO75367 372 aaKnown RBP8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 HPNP05981 417 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 ZNF10P21506 573 aaPredicted RBP8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 GRK2P25098 689 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 GDF1P27539 372 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 GP5P40197 560 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 CASP2P42575 452 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 FBXW4P57775 412 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 HERVK_113P63132 956 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 ERVK-8P63133 956 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 PPP2R2BQ00005 443 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 SORDQ00796 357 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 BST1Q10588 318 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 NTRK2Q16620 822 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 GRTP1Q5TC63 336 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 NSUN5P2Q63ZY6 315 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 DESI1Q6ICB0 168 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 FRA10AC1Q70Z53 315 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 MTDHQ86UE4 582 aaKnown RBP8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 LCA5Q86VQ0 697 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 NUDCD3Q8IVD9 361 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 SLC15A4Q8N697 577 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 SLC22A8Q8TCC7 542 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 STON2Q8WXE9 905 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 WDYHV1Q96HA8 205 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 COX4I2Q96KJ9 171 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 JSRP1Q96MG2 331 aaPredicted RBP8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 GAL3ST4Q96RP7 486 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 TBCDQ9BTW9 1192 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 DOHHQ9BU89 302 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 G6PC3Q9BUM1 346 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 EFCAB11Q9BUY7 163 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 ERVK-6Q9BXR3 956 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms