RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 UTP4Q969X6 686 aaKnown RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 CTHRC1Q96CG8 243 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 GIMAP5Q96F15 307 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 SENP5Q96HI0 755 aaPredicted RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 HOPXQ9BPY8 73 aaPredicted RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 PELOQ9BRX2 385 aaKnown RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 NUDT9Q9BW91 350 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 C1orf21Q9H246 121 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 OR51I1Q9H343 314 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 LIN28AQ9H9Z2 209 aaKnown RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 PTGFRNQ9P2B2 879 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 TMEM181Q9P2C4 612 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 C19orf25Q9UFG5 118 aaPredicted RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 EGFL7Q9UHF1 273 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 C19orf53Q9UNZ5 99 aaPredicted RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 DOCK10Q96BY6 2186 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 ANKRD11Q6UB99 2663 aaPredicted RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 CDC14CA4D256 554 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 SAGE2PA6NJ88 616 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 C21orf140B9A014 251 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 SOCS6O14544 535 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 DYRK3O43781 588 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 PLOD3O60568 738 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 KRT75O95678 551 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 ZCCHC18P0CG32 403 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 OR12D1P0DN82 309 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 PRKAR1AP10644 381 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 ACP2P11117 423 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 COX6A1P12074 109 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 NCK1P16333 377 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 MATN1P21941 496 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 RFX3P48380 749 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 MAP4K2Q12851 820 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 ATP1A4Q13733 1029 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 PCOLCEQ15113 449 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 RGNQ15493 299 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 MFSD12Q6NUT3 480 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 TMEM205Q6UW68 189 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 KIRREL2Q6UWL6 708 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 TMEM64Q6YI46 380 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 HMGN2P46Q86SG4 172 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 OR11G2Q8NGC1 345 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 DNAJB8Q8NHS0 232 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 C16orf52Q8NHV5 167 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 ZNF721Q8TF20 911 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 PIK3R3Q92569 461 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 KIAA1143Q96AT1 154 aaPredicted RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 FBXL20Q96IG2 436 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 LPAR4Q99677 370 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 KCTD14Q9BQ13 255 aaPredicted RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 ITPAQ9BY32 194 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 PCDHAC1Q9H158 963 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 OR10A5Q9H207 317 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 ALG2Q9H553 416 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 KAT8Q9H7Z6 458 aaKnown RBP9.91□□□□□ -0.82
SOX6-213ENST00000530378 FOLH1BQ9HBA9 442 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 ZNF160Q9HCG1 818 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 ABCD2Q9UBJ2 740 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 FBXL4Q9UKA2 621 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 KCNE3Q9Y6H6 103 aa9.91□□□□□ -0.82
SOX6-213ENST00000530378 C15orf38-AP3S2A0A0A6YYH1 394 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 TRBV11-1A0A0K0K1C0 115 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 PLOD2O00469 737 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 TLX3O43711 291 aaPredicted RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 PRAMEF2O60811 474 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 DNAJA2O60884 412 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 NPPAP01160 153 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 WT1P19544 449 aaPredicted RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 MMP11P24347 488 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 AQP1P29972 269 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 KHKP50053 298 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 EMDP50402 254 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 RNF144AP50876 292 aaPredicted RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 CLN3Q13286 438 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 BTBD16Q32M84 506 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 PIGGQ5H8A4 983 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 RPS26P11Q5JNZ5 115 aaPredicted RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 IGF2-ASQ6U949 168 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 RNF111Q6ZNA4 994 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 C16orf47Q6ZP98 133 aaPredicted RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 GPR155Q7Z3F1 870 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 ARPINQ7Z6K5 226 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 MRGPREQ86SM8 312 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 C9orf40Q8IXQ3 194 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 SLC16A11Q8NCK7 471 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 OR52N2Q8NGI0 321 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 CDS1Q92903 461 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 DAZLQ92904 295 aaKnown RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 ZNF578Q96N58 590 aaPredicted RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 OR7D2Q96RA2 312 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 LMF1Q96S06 567 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 GPR87Q9BY21 358 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 B3GNT4Q9C0J1 378 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 COPS7AQ9UBW8 275 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 FAF1Q9UNN5 650 aaPredicted RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 BOLA1Q9Y3E2 137 aa9.9□□□□□ -0.82
SOX6-213ENST00000530378 HEMK1Q9Y5R4 338 aaPredicted RBP9.9□□□□□ -0.82
SOX6-213ENST00000530378 NINQ8N4C6 2090 aa9.89□□□□□ -0.83
SOX6-213ENST00000530378 A0A087WV62 115 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms