RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 PGAM5Q96HS1 289 aa8.1□□□□□ -1.11
CTNND1-221ENST00000529873 FN3KQ9H479 309 aa8.1□□□□□ -1.11
CTNND1-221ENST00000529873 NUFIP1Q9UHK0 495 aaKnown RBP8.1□□□□□ -1.11
CTNND1-221ENST00000529873 DDX60Q8IY21 1712 aaKnown RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 PRSS44E7EML9 344 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 GTF2F2P13984 249 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 ZNF182P17025 639 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 GRIK2Q13002 908 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 MOGSQ13724 837 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 GAS6Q14393 721 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 COL28A1Q2UY09 1125 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 RAET1LQ5VY80 246 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 SMIM15Q7Z3B0 74 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 GPR150Q8NGU9 434 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 SLC45A3Q96JT2 553 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 OR1F2PQ96R84 312 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 ACTRT3Q9BYD9 372 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 PCTPQ9UKL6 214 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 CNOT11Q9UKZ1 510 aaKnown RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 TMEM14AQ9Y6G1 99 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 SLC22A31A6NKX4 558 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 GJE1A6NN92 205 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 PRAMEF2O60811 474 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 IFNA17P01571 189 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 ERCC1P07992 297 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 CTSAP10619 480 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 CKMT1AP12532 417 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 ADH7P40394 386 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 ALDH3B2P48448 385 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 HK3P52790 923 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 LRP8Q14114 963 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 ELOAQ14241 798 aaKnown RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 BCL2L15Q5TBC7 163 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 LIPKQ5VXJ0 399 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 C6orf89Q6UWU4 347 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 CEACAM19Q7Z692 300 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 UBQLNLQ8IYU4 475 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 RTP4Q96DX8 246 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 MUS81Q96NY9 551 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 OR10A4Q9H209 315 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 RANBP3Q9H6Z4 567 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 FAM118AQ9NWS6 357 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 CIB4A0PJX0 185 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 FTCDNL1E5RQL4 147 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 SOCS2O14508 198 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 HRGP04196 525 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 AK4P27144 223 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 CRYZQ08257 329 aaKnown RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 DEFB134Q4QY38 66 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 CLLU1OSQ5K130 101 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 PM20D1Q6GTS8 502 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 FIGLAQ6QHK4 219 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 ENPP6Q6UWR7 440 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 ZNF852Q6ZMS4 543 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.09□□□□□ -1.111e-8■■■□□ 16
CTNND1-221ENST00000529873 ZNF100Q8IYN0 542 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 NEIL3Q8TAT5 605 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 SLC41A3Q96GZ6 507 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 DPH2Q9BQC3 489 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 RARRES3Q9UL19 164 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 HCN2Q9UL51 889 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 TEX51A0A1B0GUA7 166 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 K7ERQ8 282 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 SNNO75324 88 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 HOXA11P31270 313 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 PRKAR1BP31321 381 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 RBMXP38159 391 aaKnown RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 NR0B1P51843 470 aaKnown RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 CASP6P55212 293 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 HSD11B2P80365 405 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 ZNF829Q3KNS6 432 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-221ENST00000529873 TCTE1Q5JU00 501 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 TMEM69Q5SWH9 247 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 CES4AQ5XG92 561 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 AMIGO3Q86WK7 504 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 OR1A2Q9Y585 309 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 IRS2Q9Y4H2 1338 aa8.09□□□□□ -1.11
CTNND1-221ENST00000529873 SMIM30A4D0T7 59 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 TNFRSF10AO00220 468 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 YKT6O15498 198 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 UGDHO60701 494 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 SEMA4FO95754 770 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 TGM6O95932 706 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 IFNA5P01569 189 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 CD3GP09693 182 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 NDUFV2P19404 249 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 NAA10P41227 235 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-221ENST00000529873 HHEXQ03014 270 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 NR0B2Q15466 257 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 ATAD3CQ5T2N8 411 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 SAMD12Q8N8I0 201 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 OR52N2Q8NGI0 321 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 WDR20Q8TBZ3 569 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 HOXB13Q92826 284 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-221ENST00000529873 SLC12A9Q9BXP2 914 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 SLC17A9Q9BYT1 436 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 SYT4Q9H2B2 425 aa8.08□□□□□ -1.12
CTNND1-221ENST00000529873 GSKIPQ9P0R6 139 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms