RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 KIAA1549Q9HCM3 1950 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 DOCK7Q96N67 2140 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 UQCRHLA0A096LP55 91 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 SLC22A20A6NK97 555 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 SAP18O00422 153 aaKnown RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 RAD51CO43502 376 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 ABCB7O75027 752 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 SH3BGRLO75368 114 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 PRKRAO75569 313 aaKnown RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 PPM1BO75688 479 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 TGFB1P01137 390 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 CLPSP04118 112 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 PPP3CBP16298 524 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 NAGAP17050 411 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 SSTR4P31391 388 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 GGT5P36269 586 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 CASP2P42575 452 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 HSPA7P48741 367 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 LHX2P50458 406 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 GFRA1P56159 465 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 GPX6P59796 221 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 FUT7Q11130 342 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 DLG1Q12959 904 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 CHIT1Q13231 466 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 CAPRIN1Q14444 709 aaKnown RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 TRADDQ15628 312 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 CDKL4Q5MAI5 379 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 UBAP2Q5T6F2 1119 aaKnown RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 SULT1C3Q6IMI6 304 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 MED27Q6P2C8 311 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 VWA1Q6PCB0 445 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 ZNF474Q6S9Z5 364 aaPredicted RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 PLXDC2Q6UX71 529 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 PRR22Q8IZ63 422 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 ZNF611Q8N823 705 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 MAPK1IP1LQ8NDC0 245 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 RGMAQ96B86 450 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 CTHRC1Q96CG8 243 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 ZNF845Q96IR2 970 aaPredicted RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 REG4Q9BYZ8 158 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 AMBRA1Q9C0C7 1298 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 DERL2Q9GZP9 239 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 OPN3Q9H1Y3 402 aaPredicted RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 SAYSD1Q9NPB0 183 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 LYARQ9NX58 379 aaKnown RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 EXO1Q9UQ84 846 aaKnown RBP9.44□□□□□ -0.9
COPB1-207ENST00000529866 CFL2Q9Y281 166 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 WIF1Q9Y5W5 379 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 NINQ8N4C6 2090 aa9.44□□□□□ -0.9
COPB1-207ENST00000529866 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.43□□□□□ -0.92e-7■■■■■ 27.8
COPB1-207ENST00000529866 MED12Q93074 2177 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 EML6Q6ZMW3 1958 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 TCRBV9S1A1TA0A576 114 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 PRAMEF25A6NGN4 478 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 LRRC14BA6NHZ5 514 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 FAM159BA6NKW6 160 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 A8MV72 311 aaPredicted RBP9.43□□□□□ -0.9
COPB1-207ENST00000529866 HS3ST1O14792 307 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 CCNT2O60583 730 aaKnown RBP9.43□□□□□ -0.9
COPB1-207ENST00000529866 TGM6O95932 706 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 S100BP04271 92 aaPredicted RBP9.43□□□□□ -0.9
COPB1-207ENST00000529866 ABCB1P08183 1280 aaPredicted RBP9.43□□□□□ -0.9
COPB1-207ENST00000529866 FAM157CP0CG43 387 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 CCDC166P0CW27 439 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 CD8BP10966 210 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 CD1DP15813 335 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 ZNF708P17019 499 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 LOXP28300 417 aaPredicted RBP9.43□□□□□ -0.9
COPB1-207ENST00000529866 SRD5A2P31213 254 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 IDUAP35475 653 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 STARP49675 285 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 ARFIP1P53367 373 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 SLC12A2P55011 1212 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 HNRNPH2P55795 449 aaKnown RBP9.43□□□□□ -0.9
COPB1-207ENST00000529866 SIRPAP78324 504 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 PHEXP78562 749 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 OCRLQ01968 901 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 PLCXD2Q0VAA5 305 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 ZKSCAN8Q15776 578 aaPredicted RBP9.43□□□□□ -0.9
COPB1-207ENST00000529866 DEPDC1Q5TB30 811 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 OR52E8Q6IFG1 317 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 SH2D5Q6ZV89 423 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 LRRC70Q7Z2Q7 622 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 NUP54Q7Z3B4 507 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 CMC1Q7Z7K0 106 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 GPSM1Q86YR5 675 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 OR7G1Q8NGA0 311 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 RDH11Q8TC12 318 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 EXT2Q93063 718 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 ADIPOR1Q96A54 375 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 REPS1Q96D71 796 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 ZBED6CLQ96FA7 236 aaPredicted RBP9.43□□□□□ -0.9
COPB1-207ENST00000529866 GPR22Q99680 433 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 RBBP8Q99708 897 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 SORBS1Q9BX66 1292 aaKnown RBP9.43□□□□□ -0.9
COPB1-207ENST00000529866 OR10A5Q9H207 317 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 OR51B5Q9H339 312 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 CXorf21Q9HAI6 301 aa9.43□□□□□ -0.9
COPB1-207ENST00000529866 POPDC3Q9HBV1 291 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms