RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 SELENOMQ8WWX9 145 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 PATE1Q8WXA2 126 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 NEIL2Q969S2 332 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 RAD51AP1Q96B01 352 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 EFHD2Q96C19 240 aaPredicted RBP3.95□□□□□ -1.78
CD44-226ENST00000527889 RCN3Q96D15 328 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 FRG2BQ96QU4 278 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 COQ7Q99807 217 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 SPATA25Q9BR10 227 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 SGPP1Q9BX95 441 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 TBC1D10AQ9BXI6 508 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 CADM1Q9BY67 442 aaKnown RBP3.95□□□□□ -1.78
CD44-226ENST00000527889 SLC29A3Q9BZD2 475 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 ACPTQ9BZG2 426 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 LRMDAQ9H2I8 198 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 SPNS1Q9H2V7 528 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 ELOVL6Q9H5J4 265 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 CRLF2Q9HC73 371 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 CCDC177Q9NQR7 707 aaPredicted RBP3.95□□□□□ -1.78
CD44-226ENST00000527889 KRT84Q9NSB2 600 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 TBCCD1Q9NVR7 557 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 AIG1Q9NVV5 245 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 ADPRHL2Q9NX46 363 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 EXTL2Q9UBQ6 330 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 TBC1D29Q9UFV1 150 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 TAC3Q9UHF0 121 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 LNPEPQ9UIQ6 1025 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 ADAM29Q9UKF5 820 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 ZNF490Q9ULM2 529 aaPredicted RBP3.95□□□□□ -1.78
CD44-226ENST00000527889 CLEC4AQ9UMR7 237 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 ICKQ9UPZ9 632 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 SVILO95425 2214 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 ALPK2Q86TB3 2170 aa3.95□□□□□ -1.78
CD44-226ENST00000527889 SPTY2D1-AS1A0A0U1RR47 76 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 TEX51A0A1B0GUA7 166 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 A0A1W2PR77 199 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 UBE2QL1A1L167 161 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 FAM90A20PA6NIJ5 464 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 B4DGG1 531 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SLC28A1O00337 649 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 FBP2O00757 339 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 AIM2O14862 343 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 LSM1O15116 133 aaKnown RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 GYG2O15488 501 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 YKT6O15498 198 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 RGS14O43566 566 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SULT1B1O43704 296 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 UGDHO60701 494 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 KCNJ13O60928 360 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SEC22BO75396 215 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 PRSS23O95084 383 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 RASAL1O95294 804 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ETHE1O95571 254 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 KRT6AP02538 564 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 STATHP02808 62 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 KRT6BP04259 564 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 PROS1P07225 676 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ERGP11308 486 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CTSEP14091 401 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 GNAZP19086 355 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ITGAXP20702 1163 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CDH3P22223 829 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 GPX3P22352 226 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 TGM1P22735 817 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CD27P26842 260 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CD38P28907 300 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 PRDX6P30041 224 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 PEBP1P30086 187 aaKnown RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 PKLRP30613 574 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CPOXP36551 454 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 NUDT1P36639 197 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 KRT6CP48668 564 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CSNK1EP49674 416 aaKnown RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 RAB28P51157 221 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 AFF3P51826 1226 aaKnown RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 ZNF134P52741 427 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ARFIP1P53367 373 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ARF3P61204 181 aaPredicted RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 STX1BP61266 288 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 UFM1P61960 85 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ERVK-8P63133 956 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ARF1P84077 181 aaKnown RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 SIGLEC14Q08ET2 396 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ILF3Q12906 894 aaKnown RBP eCLIP3.94□□□□□ -1.78
CD44-226ENST00000527889 FHL3Q13643 280 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CYLC2Q14093 348 aaPredicted RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 PTGR1Q14914 329 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 HERC3Q15034 1050 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 RPS6KA2Q15349 733 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ZNF124Q15973 351 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 SNCBQ16143 134 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 BAK1Q16611 211 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 CYP2A13Q16696 494 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 AP5B1Q2VPB7 878 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 GGTA1PQ4G0N0 100 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ZNF362Q5T0B9 420 aaPredicted RBP3.94□□□□□ -1.78
CD44-226ENST00000527889 IL23RQ5VWK5 629 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 METTL21CQ5VZV1 264 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 LIPJQ5W064 366 aa3.94□□□□□ -1.78
CD44-226ENST00000527889 ATG9BQ674R7 924 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms