RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 GLIPR2Q9H4G4 154 aa17.59■□□□□ 0.41
SMPD1-203ENST00000527275 BAG5Q9UL15 447 aa17.59■□□□□ 0.41
SMPD1-203ENST00000527275 ABCG2Q9UNQ0 655 aa17.59■□□□□ 0.41
SMPD1-203ENST00000527275 CCDC187A0A096LP49 1063 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 OR2W5A6NFC9 320 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 HBQ1P09105 142 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 FBLP22087 321 aaKnown RBP17.58■□□□□ 0.4
SMPD1-203ENST00000527275 DCTP40126 519 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 DSTNP60981 165 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 EIF3IQ13347 325 aaKnown RBP17.58■□□□□ 0.4
SMPD1-203ENST00000527275 DCAF12Q5T6F0 453 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 ARHGAP40Q5TG30 622 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 C6orf120Q7Z4R8 191 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 TMEM179BQ7Z7N9 219 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 MARCH9Q86YJ5 346 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 HS3ST5Q8IZT8 346 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 PSMA8Q8TAA3 256 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 AMDHD1Q96NU7 426 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 BBS4Q96RK4 519 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 DOHHQ9BU89 302 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 ULBP3Q9BZM4 244 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 ZNF696Q9H7X3 374 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 SLC22A11Q9NSA0 550 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 PSME2Q9UL46 239 aa17.58■□□□□ 0.4
SMPD1-203ENST00000527275 hCG_2039718K7EN88 272 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 B4GALT2O60909 372 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 CPNE3O75131 537 aaKnown RBP17.57■□□□□ 0.4
SMPD1-203ENST00000527275 HPRP00739 348 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 GNAO1P09471 354 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 ARAFP10398 606 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 MYF6P23409 242 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 RORAP35398 523 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 FEN1P39748 380 aaKnown RBP17.57■□□□□ 0.4
SMPD1-203ENST00000527275 CAPGP40121 348 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 CCT3P49368 545 aaKnown RBP17.57■□□□□ 0.4
SMPD1-203ENST00000527275 SELENOWP63302 87 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 VLDLRP98155 873 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 C3orf38Q5JPI3 329 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 OR2T5Q6IEZ7 315 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 CEACAM20Q6UY09 585 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 CCDC80Q76M96 950 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 OR2T29Q8NH02 315 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 OSBPL10Q9BXB5 764 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 SMURF2Q9HAU4 748 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 U3KQV3 271 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 TMEM229AB2RXF0 380 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 M0QX08 132 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 MEN1O00255 615 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 FGF17O60258 216 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 NTSP30990 170 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 NCBP2P52298 156 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMPD1-203ENST00000527275 RAB15P59190 212 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 KCNJ10P78508 379 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 ID2Q02363 134 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 NKAIN1Q4KMZ8 207 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 ZNF385CQ66K41 422 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-203ENST00000527275 PIWIL3Q7Z3Z3 882 aaKnown RBP17.57■□□□□ 0.4
SMPD1-203ENST00000527275 AKIRIN1Q9H9L7 192 aaPredicted RBP17.57■□□□□ 0.4
SMPD1-203ENST00000527275 PRDM9Q9NQV7 894 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 PNPLA3Q9NST1 481 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 SATB2Q9UPW6 733 aa17.57■□□□□ 0.4
SMPD1-203ENST00000527275 ALBP02768 609 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 FHP07954 510 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 GPC1P35052 558 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 RPS26P62854 115 aaKnown RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 DCDP81605 110 aaKnown RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 DUSP2Q05923 314 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 ZIK1Q3SY52 487 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 VWA2Q5GFL6 755 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 TMPRSS12Q86WS5 348 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 HIPK1Q86Z02 1210 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 CCDC116Q8IYX3 515 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 HORMAD2Q8N7B1 307 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 OR4K14Q8NGD5 310 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 ZFP28Q8NHY6 868 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 WDR36Q8NI36 951 aaKnown RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 TANKQ92844 425 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 ZNF681Q96N22 645 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 TAAR9Q96RI9 348 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 RBM4BQ9BQ04 359 aaKnown RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 RBM4Q9BWF3 364 aaKnown RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 CTSFQ9UBX1 484 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 MRPS33Q9Y291 106 aaKnown RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 ZNF780BQ9Y6R6 833 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 AHCTF1Q8WYP5 2266 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 ASPMQ8IZT6 3477 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 SPTBN2O15020 2390 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 MYO1GB0I1T2 1018 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 DIRAS1O95057 198 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 BMP10O95393 424 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 OPN1SWP03999 348 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 THRBP10828 461 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 XKP51811 444 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 BTG2P78543 158 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 PPP2R2BQ00005 443 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 SLC13A2Q13183 592 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 ELOAQ14241 798 aaKnown RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 CRB2Q5IJ48 1285 aa17.56■□□□□ 0.4
SMPD1-203ENST00000527275 TNFAIP8L2Q6P589 184 aaPredicted RBP17.56■□□□□ 0.4
SMPD1-203ENST00000527275 COX15Q7KZN9 410 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms