RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CAPRIN1Q14444 709 aaKnown RBP12.73□□□□□ -0.37
CD44-224ENST00000526669 LASP1Q14847 261 aaKnown RBP12.73□□□□□ -0.37
CD44-224ENST00000526669 B3GNTL1Q67FW5 361 aaPredicted RBP12.73□□□□□ -0.37
CD44-224ENST00000526669 C19orf48Q6RUI8 117 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 HSDL2Q6YN16 418 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 SLC29A4Q7RTT9 530 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 TRPM8Q7Z2W7 1104 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 MSRB3Q8IXL7 192 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 OR2L13Q8N349 312 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 GALNT16Q8N428 558 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 OR7G1Q8NGA0 311 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 GOT1L1Q8NHS2 421 aaPredicted RBP12.73□□□□□ -0.37
CD44-224ENST00000526669 RP9Q8TA86 221 aaKnown RBP12.73□□□□□ -0.37
CD44-224ENST00000526669 TSPEARQ8WU66 669 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 C16orf58Q96GQ5 468 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 TRIM8Q9BZR9 551 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 MAP10Q9P2G4 905 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.73□□□□□ -0.37
CD44-224ENST00000526669 PPIEQ9UNP9 301 aaKnown RBP12.73□□□□□ -0.37
CD44-224ENST00000526669 PCDHB14Q9Y5E9 798 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 KCNMB2Q9Y691 235 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
CD44-224ENST00000526669 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 NCKAP5O14513 1909 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 BBIP1A8MTZ0 92 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 WWP2O00308 870 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 MAN1A2O60476 641 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 COQ9O75208 318 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 BCAS2O75934 225 aaPredicted RBP12.72□□□□□ -0.37
CD44-224ENST00000526669 HMGN2P05204 90 aaKnown RBP12.72□□□□□ -0.37
CD44-224ENST00000526669 ACP2P11117 423 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 HOXB9P17482 250 aaPredicted RBP12.72□□□□□ -0.37
CD44-224ENST00000526669 PTPN6P29350 595 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 PRDX6P30041 224 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 TRPC1P48995 793 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 LRRC74AQ0VAA2 488 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 STX5Q13190 355 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 EBPQ15125 230 aaKnown RBP12.72□□□□□ -0.37
CD44-224ENST00000526669 HLA-DQA1Q5Y7H0 255 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 FAM91A1Q658Y4 838 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 TCTN3Q6NUS6 607 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 TMEM64Q6YI46 380 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 C6orf120Q7Z4R8 191 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 TRIML2Q8N7C3 387 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 OR56A1Q8NGH5 318 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 SLC9A6Q92581 669 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 JADE3Q92613 823 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 GIMAP5Q96F15 307 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 MS4A4EQ96PG1 132 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 SLC39A3Q9BRY0 314 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 WWTR1Q9GZV5 400 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 LHPPQ9H008 270 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 SERHL2Q9H4I8 314 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 CDCP1Q9H5V8 836 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.72□□□□□ -0.37
CD44-224ENST00000526669 SLC25A37Q9NYZ2 338 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 VAPAQ9P0L0 249 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 ZZEF1O43149 2961 aa12.72□□□□□ -0.37
CD44-224ENST00000526669 C2orf92A0A1B0GVN3 265 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 TMEM200CA6NKL6 621 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 OR6C76A6NM76 312 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 ERN1O75460 977 aaKnown RBP12.71□□□□□ -0.37
CD44-224ENST00000526669 ZFAND5O76080 213 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 UBOX5O94941 541 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 PSMG1O95456 288 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 ICAM2P13598 275 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 NUDT2P50583 147 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 NR0B1P51843 470 aaKnown RBP12.71□□□□□ -0.37
CD44-224ENST00000526669 CORO7P57737 925 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 SELPLGQ14242 412 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 TBR1Q16650 682 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 TRMT5Q32P41 509 aaKnown RBP12.71□□□□□ -0.37
CD44-224ENST00000526669 COX20Q5RI15 118 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 LRIF1Q5T3J3 769 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 IRAK1BP1Q5VVH5 260 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 SAXO2Q658L1 398 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 MFSD12Q6NUT3 480 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 TNFAIP8L2Q6P589 184 aaPredicted RBP12.71□□□□□ -0.37
CD44-224ENST00000526669 DLEU7Q6UYE1 221 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 NPSR1Q6W5P4 371 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 RNF130Q86XS8 419 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 PRR22Q8IZ63 422 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 DPP10Q8N608 796 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 OR5D16Q8NGK9 328 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 ZFP90Q8TF47 636 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 PSMF1Q92530 271 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 EXTL1Q92935 676 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 MOAP1Q96BY2 351 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 CMTM5Q96DZ9 223 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 CGREF1Q99674 301 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 NXF5Q9H1B4 397 aaKnown RBP12.71□□□□□ -0.37
CD44-224ENST00000526669 EPS8L2Q9H6S3 715 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 GPATCH2Q9NW75 528 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 GPR83Q9NYM4 423 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 NTMQ9P121 344 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 PRODH2Q9UF12 536 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 TAGLN3Q9UI15 199 aa12.71□□□□□ -0.37
CD44-224ENST00000526669 PIEZO2Q9H5I5 2752 aa12.71□□□□□ -0.38
CD44-224ENST00000526669 GXYLT2A0PJZ3 443 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms