RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 RFWD2Q8NHY2 731 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 FAM57AQ8TBR7 257 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 RND1Q92730 232 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 IMMP1LQ96LU5 166 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 PPP3R2Q96LZ3 170 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ZNF681Q96N22 645 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 RPF2Q9H7B2 306 aaKnown RBP10.11□□□□□ -0.79
NEDD8-204ENST00000526430 COPS7BQ9H9Q2 264 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-204ENST00000526430 C14orf105Q9NVL8 296 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 LYARQ9NX58 379 aaKnown RBP10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ASIC5Q9NY37 505 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 ERVK-11Q9UQG0 969 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 CUBNO60494 3623 aa10.11□□□□□ -0.79
NEDD8-204ENST00000526430 A0A088AWK7 358 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 SLCO1B7G3V0H7 640 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 PRMT3O60678 531 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 TGDSO95455 350 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 TPOP07202 933 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 CELA2AP08217 269 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 IL3P08700 152 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 ZNF10P21506 573 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-204ENST00000526430 CPN2P22792 545 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 ZFP36L2P47974 494 aaKnown RBP10.1□□□□□ -0.79
NEDD8-204ENST00000526430 SEC24CP53992 1094 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 RPL38P63173 70 aaKnown RBP10.1□□□□□ -0.79
NEDD8-204ENST00000526430 HSF1Q00613 529 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 ID2Q02363 134 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 MGAT2Q10469 447 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 IMPG1Q17R60 797 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 SMU1Q2TAY7 513 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 LSM12Q3MHD2 195 aaKnown RBP10.1□□□□□ -0.79
NEDD8-204ENST00000526430 GALNTL6Q49A17 601 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 ZNF385BQ569K4 471 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 NDUFAF5Q5TEU4 345 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 OGFOD2Q6N063 350 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 FAM180BQ6P0A1 224 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 SLC48A1Q6P1K1 146 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 CYP20A1Q6UW02 462 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 PAGE2Q7Z2X7 111 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 HOMEZQ8IX15 550 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 PHC2Q8IXK0 858 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 ZNF595Q8IYB9 648 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 TMEM178AQ8NBL3 297 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 FAM98AQ8NCA5 519 aaKnown RBP10.1□□□□□ -0.79
NEDD8-204ENST00000526430 SIMC1Q8NDZ2 872 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 ACTRT2Q8TDY3 377 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 DYDC1Q8WWB3 177 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 TUBGCP3Q96CW5 907 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 CNRIP1Q96F85 164 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-204ENST00000526430 TEX37Q96LM6 180 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 PTCHD1Q96NR3 888 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 CENPKQ9BS16 269 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 MYNNQ9NPC7 610 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 PRDM9Q9NQV7 894 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 PRTFDC1Q9NRG1 225 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 FGFR1OP2Q9NVK5 253 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 MS4A12Q9NXJ0 267 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 TAS2R7Q9NYW3 318 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 VTI1BQ9UEU0 232 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 PHF11Q9UIL8 331 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 MMACHCQ9Y4U1 282 aa10.1□□□□□ -0.79
NEDD8-204ENST00000526430 C1orf226A1L170 272 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 GABRR3A8MPY1 467 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 INAFM1C9JVW0 142 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 ZNHIT1O43257 154 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 GPR75O95800 540 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 HEXBP07686 556 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 CYC1P08574 325 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 G6PDP11413 515 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 IL12AP29459 219 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 PEX19P40855 299 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 AQP5P55064 265 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 SKP1P63208 163 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 PHC1P78364 1004 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 C2orf80Q0P641 193 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 PDE7AQ13946 482 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 PTGR1Q14914 329 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 MINDY4Q4G0A6 757 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 CD163Q86VB7 1156 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 ZZZ3Q8IYH5 903 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 LIX1Q8N485 282 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 KRTCAP2Q8N6L1 136 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 PTPMT1Q8WUK0 201 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-204ENST00000526430 TANKQ92844 425 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 THOC1Q96FV9 657 aaKnown RBP10.09□□□□□ -0.79
NEDD8-204ENST00000526430 TSSK3Q96PN8 268 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 C1orf50Q9BV19 199 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 ALOXE3Q9BYJ1 711 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 ZNF700Q9H0M5 742 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 TP63Q9H3D4 680 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-204ENST00000526430 NEUROD4Q9HD90 331 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 ZNF223Q9UK11 482 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-204ENST00000526430 PPIEQ9UNP9 301 aaKnown RBP10.09□□□□□ -0.79
NEDD8-204ENST00000526430 WBP11Q9Y2W2 641 aaKnown RBP10.09□□□□□ -0.79
NEDD8-204ENST00000526430 TMED5Q9Y3A6 229 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 GPR45Q9Y5Y3 372 aa10.09□□□□□ -0.79
NEDD8-204ENST00000526430 ANK2Q01484 3957 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 TRPC5OSA6NMA1 111 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 RNF212BA8MTL3 300 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 TBX19O60806 448 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms