RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 TAGAPQ8N103 731 aa17.35■□□□□ 0.37
PTPRK-218ENST00000525459 NUP43Q8NFH3 380 aa17.35■□□□□ 0.37
PTPRK-218ENST00000525459 CXorf36Q9H7Y0 433 aa17.35■□□□□ 0.37
PTPRK-218ENST00000525459 LEF1Q9UJU2 399 aaPredicted RBP17.35■□□□□ 0.37
PTPRK-218ENST00000525459 DSPP15924 2871 aaKnown RBP17.35■□□□□ 0.37
PTPRK-218ENST00000525459 LOC400499M0QZD8 3231 aa17.35■□□□□ 0.37
PTPRK-218ENST00000525459 ZZEF1O43149 2961 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 BBIP1A8MTZ0 92 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 ANGPT2O15123 496 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 ACOX3O15254 700 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 SNRPB2P08579 225 aaKnown RBP17.34■□□□□ 0.37
PTPRK-218ENST00000525459 ZCCHC18P0CG32 403 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 UQCRC2P22695 453 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 CASRP41180 1078 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 PRIM2P49643 509 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 NRG3P56975 720 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 ZNF155Q12901 538 aaPredicted RBP17.34■□□□□ 0.37
PTPRK-218ENST00000525459 KLF10Q13118 480 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 LINC00303Q3SY05 128 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 COQ5Q5HYK3 327 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 IGFL2Q6UWQ7 119 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 SZRD1Q7Z422 152 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 GPALPP1Q8IXQ4 340 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 CDRT4Q8N9R6 151 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 C9orf43Q8TAL5 461 aaPredicted RBP17.34■□□□□ 0.37
PTPRK-218ENST00000525459 VPS33AQ96AX1 596 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 HSPBAP1Q96EW2 488 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 VSTM2LQ96N03 204 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 BTBD9Q96Q07 612 aa17.34■□□□□ 0.37
PTPRK-218ENST00000525459 ERN1O75460 977 aaKnown RBP17.33■□□□□ 0.37
PTPRK-218ENST00000525459 ITGA10O75578 1167 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 ANP32DO95626 131 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 CPSF4O95639 269 aaKnown RBP17.33■□□□□ 0.37
PTPRK-218ENST00000525459 CAPN3P20807 821 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 PPICP45877 212 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 TMED10P49755 219 aaKnown RBP17.33■□□□□ 0.37
PTPRK-218ENST00000525459 TXNL4AP83876 142 aaKnown RBP17.33■□□□□ 0.37
PTPRK-218ENST00000525459 DUSP8Q13202 625 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 UBAP2LQ14157 1087 aaKnown RBP17.33■□□□□ 0.37
PTPRK-218ENST00000525459 C6orf10Q5SRN2 563 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 IGFL3Q6UXB1 125 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 ZNF441Q8N8Z8 693 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 DOK4Q8TEW6 326 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 ADIPOR1Q96A54 375 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 LCORQ96JN0 433 aaPredicted RBP17.33■□□□□ 0.37
PTPRK-218ENST00000525459 CDCP1Q9H5V8 836 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 FOLH1BQ9HBA9 442 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 SERHLQ9NQF3 203 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 NDUFAF1Q9Y375 327 aa17.33■□□□□ 0.37
PTPRK-218ENST00000525459 MGAQ8IWI9 3026 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 RNF103-CHMP3A0A140T963 221 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 FRG2CA6NGY1 282 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 NDUFAB1O14561 156 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 PRKNO60260 465 aaPredicted RBP17.33■□□□□ 0.36
PTPRK-218ENST00000525459 DRD5P21918 477 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 TRHRP34981 398 aaPredicted RBP17.33■□□□□ 0.36
PTPRK-218ENST00000525459 MAGEA8P43361 318 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 SSR4P51571 173 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 TP53BP2Q13625 1128 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 RAPSNQ13702 412 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 OPN5Q6U736 354 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 GK5Q6ZS86 529 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 MTDHQ86UE4 582 aaKnown RBP17.33■□□□□ 0.36
PTPRK-218ENST00000525459 CCDC197Q8NCU1 140 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 GTF2H4Q92759 462 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 ABHD17AQ96GS6 310 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 MAGED4Q96JG8 741 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 LMF2Q9BU23 707 aaKnown RBP17.33■□□□□ 0.36
PTPRK-218ENST00000525459 ITPAQ9BY32 194 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 SLC52A3Q9NQ40 469 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 GIN1Q9NXP7 522 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 STMN3Q9NZ72 180 aa17.33■□□□□ 0.36
PTPRK-218ENST00000525459 CACNA1BQ00975 2339 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 TMEM200CA6NKL6 621 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 CAPN14A8MX76 684 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 ANXA11P50995 505 aaKnown RBP17.32■□□□□ 0.36
PTPRK-218ENST00000525459 B3GNTL1Q67FW5 361 aaPredicted RBP17.32■□□□□ 0.36
PTPRK-218ENST00000525459 MFSD12Q6NUT3 480 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 HORMAD2Q8N7B1 307 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 BCAS4Q8TDM0 211 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 THAP3Q8WTV1 239 aaPredicted RBP17.32■□□□□ 0.36
PTPRK-218ENST00000525459 HOXB13Q92826 284 aaPredicted RBP17.32■□□□□ 0.36
PTPRK-218ENST00000525459 LRRC37BQ96QE4 947 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 PHF12Q96QT6 1004 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 UBL7Q96S82 380 aaPredicted RBP17.32■□□□□ 0.36
PTPRK-218ENST00000525459 MYLK2Q9H1R3 596 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 ANKRA2Q9H9E1 313 aa17.32■□□□□ 0.36
PTPRK-218ENST00000525459 FAF1Q9UNN5 650 aaPredicted RBP17.32■□□□□ 0.36
PTPRK-218ENST00000525459 GPR55Q9Y2T6 319 aaPredicted RBP17.32■□□□□ 0.36
PTPRK-218ENST00000525459 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 A0A096LPI6 279 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 TO15178 435 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 DPM1O60762 260 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 OR2J2O76002 312 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 KCNH1O95259 989 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 FAM87AP0C7U9 286 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 PRKAG1P54619 331 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 STX5Q13190 355 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 LACTB2Q53H82 288 aaPredicted RBP17.31■□□□□ 0.36
PTPRK-218ENST00000525459 PIGGQ5H8A4 983 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms