RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 OGDHQ02218 1023 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 CRYZQ08257 329 aaKnown RBP13.07□□□□□ -0.32
LRRK1-202ENST00000525284 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 OR52E2Q8NGJ4 325 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 OR4K15Q8NH41 348 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 NT5C3BQ969T7 300 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 MRPL22Q9NWU5 206 aaKnown RBP13.07□□□□□ -0.32
LRRK1-202ENST00000525284 MRPS17Q9Y2R5 130 aaKnown RBP13.07□□□□□ -0.32
LRRK1-202ENST00000525284 PRSS51A0A1B0GVH4 220 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 LIPJQ5W064 366 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 TMIGD1Q6UXZ0 262 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 KDM8Q8N371 416 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SLC15A4Q8N697 577 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 LMX1AQ8TE12 382 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SLC5A11Q8WWX8 675 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 MTFR1LQ9H019 292 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 PTPRUQ92729 1446 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 A0A1W2PQL4 384 aaPredicted RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 LRP5LA4QPB2 252 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 ZNF860A6NHJ4 632 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 FBXO24O75426 580 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 DLX2Q07687 328 aaPredicted RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 SLC14A1Q13336 389 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 ZNF425Q6IV72 752 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 SVBPQ8N300 66 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 PCED1BQ96HM7 432 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 HHIPL1Q96JK4 782 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 LRR1Q96L50 414 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 SLC29A3Q9BZD2 475 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 HIPK2Q9H2X6 1198 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 EIF2B3Q9NR50 452 aaKnown RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 FBXW11Q9UKB1 542 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 CBY1Q9Y3M2 126 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 ARPC1BO15143 372 aaKnown RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 RAD1O60671 282 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 MSCO60682 206 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 CST3P01034 146 aaPredicted RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 RHCEP18577 417 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 GPR4P46093 362 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 CAMK2DQ13557 499 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 BRICD5Q6PL45 260 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 GDPD4Q6W3E5 623 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 GPR142Q7Z601 462 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 VSIG10LQ86VR7 867 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 TXNDC15Q96J42 360 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 MICU1Q9BPX6 476 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 FBRSL1Q9HCM7 1045 aaKnown RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 KIF25Q9UIL4 384 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 FBXO7Q9Y3I1 522 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 DVL2O14641 736 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 ONECUT3O60422 494 aaPredicted RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 RAB3DO95716 219 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 PTPN2P17706 415 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 WDR4P57081 412 aaKnown RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 MRPS34P82930 218 aaKnown RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 APOFQ13790 326 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 FAM214AQ32MH5 1076 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 FBXW12Q6X9E4 464 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 CREB3L2Q70SY1 520 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 GPR137CQ8N3F9 429 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 TSTD1Q8NFU3 115 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 SMPDL3AQ92484 453 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 PIP5K1AQ99755 562 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 PLEKHJ1Q9NW61 149 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 GHRLQ9UBU3 117 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 SERTAD3Q9UJW9 196 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 KCNK6Q9Y257 313 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 FBXO45P0C2W1 286 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 UQCRC2P22695 453 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 PRSS3P35030 304 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 EPGNQ6UW88 154 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 OR5AK2Q8NH90 309 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 CYB5D2Q8WUJ1 264 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 SNAPC3Q92966 411 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 RBMXL1Q96E39 390 aaKnown RBP13.06□□□□□ -0.32
LRRK1-202ENST00000525284 SUV39H2Q9H5I1 410 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 OSGIN2Q9Y236 505 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 TMEM98Q9Y2Y6 226 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 SEC14L5O43304 696 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 DLX3O60479 287 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 CLEC3BP05452 202 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 LYSMD3Q7Z3D4 306 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 FJX1Q86VR8 437 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 ACKR4Q9NPB9 350 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 GPR83Q9NYM4 423 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 CACNG4Q9UBN1 327 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 COPS3Q9UNS2 423 aa13.06□□□□□ -0.32
LRRK1-202ENST00000525284 OR5H15A6NDH6 313 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 OR5H14A6NHG9 310 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 OR5H1A6NKK0 313 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 FTCDNL1E5RQL4 147 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 DVL1O14640 695 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 DVL1P1P54792 670 aaPredicted RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 FAM182AQ5T1J6 154 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 NRROSQ86YC3 692 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 BBS10Q8TAM1 723 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 UQCC2Q9BRT2 126 aa13.05□□□□□ -0.32
LRRK1-202ENST00000525284 NXF5Q9H1B4 397 aaKnown RBP13.05□□□□□ -0.32
LRRK1-202ENST00000525284 SMOXQ9NWM0 555 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms