RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 HK1P19367 917 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 EIF1AXP47813 144 aaKnown RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 KIAA0895LQ68EN5 471 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 UGT2A3Q6UWM9 527 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 MEX3DQ86XN8 651 aaKnown RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 THEM6Q8WUY1 208 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 BARD1Q99728 777 aaKnown RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 CPPED1Q9BRF8 314 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 POLDIP3Q9BY77 421 aaKnown RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 MTHFD2LQ9H903 347 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 TEX10Q9NXF1 929 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 HYKKA2RU49 373 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 POM121BA6NF01 834 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 DBIP07108 87 aaKnown RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 GNAO1P09471 354 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 MYF6P23409 242 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR12D2P58182 307 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 TUBB3Q13509 450 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 SYPL1Q16563 259 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 FAM109BQ6ICB4 259 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF675Q8TD23 568 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 ELSPBP1Q96BH3 223 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 FAM46AQ96IP4 442 aaKnown RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 CNDP2Q96KP4 475 aaKnown RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 EPHX3Q9H6B9 360 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF696Q9H7X3 374 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 TRIM36Q9NQ86 728 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 TMEM9Q9P0T7 183 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 GPC6Q9Y625 555 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 A0A1B0GW55 424 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 NPIPA5E9PKD4 350 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 H0YGG7 62 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 AK1P00568 194 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 RLN1P04808 185 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 DUX4L2P0CJ85 424 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 DUX4L3P0CJ86 424 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 DUX4L4P0CJ87 422 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 DUX4L5P0CJ88 424 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 DUX4L6P0CJ89 424 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 DUX4L7P0CJ90 424 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 NUP62P37198 522 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 ARF3P61204 181 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 BCL7AQ4VC05 210 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 CHERPQ8IWX8 916 aaKnown RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 TDHQ8IZJ6 230 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 VWA5B2Q8N398 1253 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR1E3Q8WZA6 343 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 FGF14Q92915 247 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 GORASP2Q9H8Y8 452 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 NMNAT1Q9HAN9 279 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 PLAC1Q9HBJ0 212 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 UBAP1Q9NZ09 502 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 DUX4Q9UBX2 424 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 NPIPA1Q9UND3 350 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 PLCL2Q9UPR0 1127 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 FOXE1O00358 373 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 PROM1O43490 865 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 CTSLP07711 333 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 EIF2DP41214 584 aaKnown RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 XCR1P46094 333 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 YPEL5P62699 121 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 EXOSC7Q15024 291 aaKnown RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 CCNJQ5T5M9 372 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 YIPF7Q8N8F6 280 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR13H1Q8NG92 308 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR2AJ1Q8NGZ0 328 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 NEK7Q8TDX7 302 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 HPS1Q92902 700 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 NKD1Q969G9 470 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ITFG2Q969R8 447 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 TM9SF2Q99805 663 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 GRHPRQ9UBQ7 328 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF222Q9UK12 451 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZFR2Q9UPR6 939 aaKnown RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 PCDHGB1Q9Y5G3 927 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 PCDHA9Q9Y5H5 950 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 C2orf92A0A1B0GVN3 265 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 B3GALT4O96024 378 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ADAP00813 363 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 TPMTP51580 245 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 PPP3R1P63098 170 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 MEDAGQ5VYS4 303 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 FAM180AQ6UWF9 173 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 DCP2Q8IU60 420 aaKnown RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 TMEM151BQ8IW70 566 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 LILRA2Q8N149 483 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 CDRT4Q8N9R6 151 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF548Q8NEK5 533 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR2L3Q8NG85 312 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 CAPSLQ8WWF8 208 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 SECISBP2Q96T21 854 aaKnown RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 AASSQ9UDR5 926 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 UBE2QL1A1L167 161 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 M0R129 80 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 PSMD9O00233 223 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 WWP2O00308 870 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 CDC40O60508 579 aaKnown RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms