RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 MSRB3Q8IXL7 192 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 OR2L13Q8N349 312 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 MORN4Q8NDC4 146 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 OR5AK3PQ8NH89 298 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 SLC2A12Q8TD20 617 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 ZNF721Q8TF20 911 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 FAM120BQ96EK7 910 aaKnown RBP11.09□□□□□ -0.63
PVT1-215ENST00000522963 FBXL20Q96IG2 436 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 THOC3Q96J01 351 aaKnown RBP11.09□□□□□ -0.63
PVT1-215ENST00000522963 IMMP1LQ96LU5 166 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 NUDT9Q9BW91 350 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 OR8D2Q9GZM6 311 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 IL1RL2Q9HB29 575 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 SLC25A37Q9NYZ2 338 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 NTMQ9P121 344 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 PTGFRNQ9P2B2 879 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 VPS4AQ9UN37 437 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 PCDHB14Q9Y5E9 798 aa11.09□□□□□ -0.63
PVT1-215ENST00000522963 TRBV5-3A0A0A0MS03 114 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 RNF103-CHMP3A0A140T963 221 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 FXYD1O00168 92 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 EMC8O43402 210 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 DYRK3O43781 588 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 NME6O75414 186 aaPredicted RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 ERN1O75460 977 aaKnown RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 ANP32DO95626 131 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 PDGFAP04085 211 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 IGKV3-11P04433 115 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 CELA2AP08217 269 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 IFI6P09912 130 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 ESRRAP11474 423 aaPredicted RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 CALB2P22676 271 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 UQCRC2P22695 453 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 CCT3P49368 545 aaKnown RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 CAPRIN1Q14444 709 aaKnown RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 TRMT5Q32P41 509 aaKnown RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 SPDYE7PQ495Y7 208 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 ZNF615Q8N8J6 731 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 TEX19Q8NA77 164 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 PCYOX1LQ8NBM8 494 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 APCDD1LQ8NCL9 501 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 NUP43Q8NFH3 380 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 B3GNT7Q8NFL0 401 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 OR52R1Q8NGF1 315 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 OR1N1Q8NGS0 311 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 SFXN5Q8TD22 340 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 NCLNQ969V3 563 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 AURKBQ96GD4 344 aaPredicted RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 SLC35A5Q9BS91 424 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 TUBB6Q9BUF5 446 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 MFRPQ9BY79 579 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 EPS8L2Q9H6S3 715 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 EFCAB1Q9HAE3 211 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 DDX18Q9NVP1 670 aaKnown RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 VAPAQ9P0L0 249 aa11.08□□□□□ -0.64
PVT1-215ENST00000522963 ZNF223Q9UK11 482 aaPredicted RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 PPIEQ9UNP9 301 aaKnown RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 C19orf53Q9UNZ5 99 aaPredicted RBP11.08□□□□□ -0.64
PVT1-215ENST00000522963 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 PSMG1O95456 288 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 NUDT2P50583 147 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 PRKAG1P54619 331 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 SLC37A1P57057 533 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 Q0VFX4 171 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 MYBPC3Q14896 1274 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 BTBD16Q32M84 506 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 SAXO2Q658L1 398 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 PLAG1Q6DJT9 500 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 SZRD1Q7Z422 152 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 C6orf120Q7Z4R8 191 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 KBTBD2Q8IY47 623 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 KIF2BQ8N4N8 673 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 TRIML2Q8N7C3 387 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 OR7G1Q8NGA0 311 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 OR56A1Q8NGH5 318 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 DNAJB8Q8NHS0 232 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 FBXO27Q8NI29 283 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 ZFP90Q8TF47 636 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 LRRC58Q96CX6 371 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 NEURL3Q96EH8 262 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 GIMAP5Q96F15 307 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 ART5Q96L15 291 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 CGREF1Q99674 301 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 SLC39A3Q9BRY0 314 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 LHPPQ9H008 270 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 OR10A5Q9H207 317 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 C3orf14Q9HBI5 128 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 ZCCHC3Q9NUD5 404 aaKnown RBP11.07□□□□□ -0.64
PVT1-215ENST00000522963 GID8Q9NWU2 228 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 BCAP29Q9UHQ4 241 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 ZNF451Q9Y4E5 1061 aa11.07□□□□□ -0.64
PVT1-215ENST00000522963 PCDHGA9Q9Y5G4 932 aaKnown RBP11.07□□□□□ -0.64
PVT1-215ENST00000522963 LOC400499M0QZD8 3231 aa11.06□□□□□ -0.64
PVT1-215ENST00000522963 B8ZZF3 427 aa11.06□□□□□ -0.64
PVT1-215ENST00000522963 CLIC1O00299 241 aa11.06□□□□□ -0.64
PVT1-215ENST00000522963 EBAG9O00559 213 aa11.06□□□□□ -0.64
PVT1-215ENST00000522963 SLC28A2O43868 658 aa11.06□□□□□ -0.64
PVT1-215ENST00000522963 PRKNO60260 465 aaPredicted RBP11.06□□□□□ -0.64
PVT1-215ENST00000522963 PRAMEF2O60811 474 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms