RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 GLRA3O75311 464 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 STX11O75558 287 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 RNF8O76064 485 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 H1F0P07305 194 aaKnown RBP3.64□□□□□ -1.83
SKP1-209ENST00000522552 ARSBP15848 533 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 COMTP21964 271 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 GPX3P22352 226 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 CBLP22681 906 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 CFPP27918 469 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 PPP2R1BP30154 601 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 RRM2P31350 389 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 ATP1B3P54709 279 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 LINC00310P59036 64 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 SEC61BP60468 96 aaKnown RBP3.64□□□□□ -1.83
SKP1-209ENST00000522552 TNNC1P63316 161 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 PEX6Q13608 980 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 ITIH4Q14624 930 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 TAF13Q15543 124 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 USF2Q15853 346 aaPredicted RBP3.64□□□□□ -1.83
SKP1-209ENST00000522552 SGSM1Q2NKQ1 1148 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 ZNF699Q32M78 642 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 SLC9C1Q4G0N8 1177 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 SFT2D3Q587I9 215 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 EARS2Q5JPH6 523 aaKnown RBP3.64□□□□□ -1.83
SKP1-209ENST00000522552 GPR157Q5UAW9 335 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 CWC27Q6UX04 472 aaKnown RBP3.64□□□□□ -1.83
SKP1-209ENST00000522552 VITQ6UXI7 678 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 DPY19L2P2Q6ZN68 376 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 RHOUQ7L0Q8 258 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 H2BFWTQ7Z2G1 175 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 MRPL10Q7Z7H8 261 aaKnown RBP3.64□□□□□ -1.83
SKP1-209ENST00000522552 PARP8Q8N3A8 854 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 MFSD9Q8NBP5 474 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 CCDC197Q8NCU1 140 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 SDR9C7Q8NEX9 313 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 SPATA22Q8NHS9 363 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 CACNG8Q8WXS5 425 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 ADIPOR1Q96A54 375 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 PHF21AQ96BD5 680 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 C10orf35Q96D05 121 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 ASB9Q96DX5 294 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 ELMO2Q96JJ3 720 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 RITA1Q96K30 269 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 LMLNQ96KR4 655 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 ALS2CR12Q96Q35 445 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 OR52A5Q9H2C5 316 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 LRMDAQ9H2I8 198 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 LRRN3Q9H3W5 708 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 SMARCAL1Q9NZC9 954 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 ENPP5Q9UJA9 477 aa3.64□□□□□ -1.83
SKP1-209ENST00000522552 GOLGA8QA0A0J9YX86 632 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 A0A1W2PPE3 182 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 OR5K3A6NET4 321 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 PDZK1P1A8MUH7 402 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 NUAK1O60285 661 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 TSPAN2O60636 221 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 TPST2O60704 377 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 HCN1O60741 890 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 NDUFS6O75380 124 aaKnown RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 PRKRAO75569 313 aaKnown RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 MED14OSP0DP75 135 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 FGF5P12034 268 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 ATP1B2P14415 290 aaPredicted RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 CSTF2P33240 577 aaKnown RBP eCLIP3.63□□□□□ -1.83
SKP1-209ENST00000522552 MAGEA9P43362 315 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 GSCP56915 257 aaPredicted RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 ISL1P61371 349 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 GHRHRQ02643 423 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 TAF10Q12962 218 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 MESDQ14696 234 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 MEF2DQ14814 521 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 MRPL23Q16540 153 aaKnown RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 C6orf183Q5T699 404 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 FAM71F2Q6NXP2 309 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 SLC27A4Q6P1M0 643 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 ZNF852Q6ZMS4 543 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 Q6ZNX1 250 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 P4HA3Q7Z4N8 544 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 ACOT1Q86TX2 421 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 PTOV1Q86YD1 416 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 ARHGEF19Q8IW93 802 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 ZNF34Q8IZ26 560 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 ST13P4Q8IZP2 240 aaPredicted RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 FGFRL1Q8N441 504 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 LMNTD1Q8N9Z9 388 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 POC1AQ8NBT0 407 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 CHDHQ8NE62 594 aaPredicted RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 PROKR2Q8NFJ6 384 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 OR13C3Q8NGS6 347 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 OR13C9Q8NGT0 318 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 WFIKKN2Q8TEU8 576 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 ARNTL2Q8WYA1 636 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 C12orf42Q96LP6 360 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 ZNF317Q96PQ6 595 aaPredicted RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 UHRF2Q96PU4 802 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 SLC38A2Q96QD8 506 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 TMEM246Q9BRR3 403 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 TMEM175Q9BSA9 504 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 DPH7Q9BTV6 452 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 FUCA2Q9BTY2 467 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms