RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 IFNW1P05000 195 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 RPLP0P05388 317 aaKnown RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 LCKP06239 509 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 KLK1P06870 262 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TFPTP0C1Z6 253 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ADORA3P0DMS8 318 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ACRP10323 421 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 OSMP13725 252 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 EPCAMP16422 314 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 PI3P19957 117 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 PSMB9P28065 219 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CHI3L1P36222 383 aaPredicted RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 TRIM23P36406 574 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TSFMP43897 325 aaKnown RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 PRIM2P49643 509 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CCR8P51685 355 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CRISP1P54107 249 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CDH12P55289 794 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 SMIM11AP58511 58 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CDC42P60953 191 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 VBP1P61758 197 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 EFNB1P98172 346 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 IFITM3Q01628 133 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 MC1RQ01726 317 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 NFE2L1Q14494 772 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ZNF234Q14588 700 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 PUM1Q14671 1186 aaKnown RBP eCLIP4.76□□□□□ -1.65
SDC2-204ENST00000519914 STARD3Q14849 445 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 HEPACAMQ14CZ8 416 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 NCF4Q15080 339 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 PDGFRLQ15198 375 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ZIC1Q15915 447 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 NDUFA9Q16795 377 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TIGD6Q17RP2 521 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ZNF181Q2M3W8 571 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TIMM50Q3ZCQ8 353 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ZNF404Q494X3 552 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TMEM35AQ53FP2 167 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TCEAL5Q5H9L2 206 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TMEM240Q5SV17 173 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 PIP5KL1Q5T9C9 394 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 FAM46CQ5VWP2 391 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 SIGIRRQ6IA17 410 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 MRM1Q6IN84 353 aaKnown RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 FRMPD2BQ6IN97 320 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 PNCKQ6P2M8 343 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 KLHL17Q6TDP4 642 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 AHSA2Q719I0 299 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TRMT11Q7Z4G4 463 aaKnown RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 GRASPQ7Z6J2 395 aaPredicted RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 DSG4Q86SJ6 1040 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 MRGPREQ86SM8 312 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 SLC51BQ86UW2 128 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 LRRTM4Q86VH4 590 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 AMZ2Q86W34 360 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 C17orf64Q86WR6 236 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TRAPPC5Q8IUR0 188 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 SLC44A2Q8IWA5 706 aaPredicted RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 TMCO5AQ8N6Q1 288 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 NAT16Q8N8M0 369 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ANKRD53Q8N9V6 530 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 FAM46DQ8NEK8 389 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 GPR156Q8NFN8 814 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 KBTBD8Q8NFY9 601 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 GPR32P1Q8NGA4 272 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ZNF675Q8TD23 568 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CXorf40AQ8TE69 158 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CREB3L4Q8TEY5 395 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 HERVK_113Q902F9 699 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 NR4A3Q92570 626 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TFGQ92734 400 aaPredicted RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 FGF11Q92914 225 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CIDECQ96AQ7 238 aaPredicted RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 MOAP1Q96BY2 351 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ZNF354BQ96LW1 612 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CCDC74BQ96LY2 380 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 KCNC2Q96PR1 638 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TEFMQ96QE5 360 aaKnown RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 NIPSNAP1Q9BPW8 284 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 UQCC2Q9BRT2 126 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 RHNO1Q9BSD3 238 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 TIMM29Q9BSF4 260 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 RAB11FIP5Q9BXF6 653 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CCDC90BQ9GZT6 254 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 DCSTAMPQ9H295 470 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 OR51B5Q9H339 312 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 DSN1Q9H410 356 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 MTG2Q9H4K7 406 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 ZNF556Q9HAH1 456 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CPNE5Q9HCH3 593 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 SLAMF7Q9NQ25 335 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 LHX9Q9NQ69 397 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 DYRK4Q9NR20 520 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 MRPS18AQ9NVS2 196 aaKnown RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 RLIMQ9NVW2 624 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 THAP10Q9P2Z0 257 aaPredicted RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 ACSL5Q9ULC5 683 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 LSM2Q9Y333 95 aaKnown RBP4.76□□□□□ -1.65
SDC2-204ENST00000519914 TESMINQ9Y4I5 508 aa4.76□□□□□ -1.65
SDC2-204ENST00000519914 CFAP20Q9Y6A4 193 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms