RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 HEY2Q9UBP5 337 aa7.58□□□□□ -1.2
CTNNA1-215ENST00000519309 LPAR3Q9UBY5 353 aa7.58□□□□□ -1.2
CTNNA1-215ENST00000519309 SNX24Q9Y343 169 aa7.58□□□□□ -1.2
CTNNA1-215ENST00000519309 SAR1BQ9Y6B6 198 aa7.58□□□□□ -1.2
CTNNA1-215ENST00000519309 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.58□□□□□ -1.2
CTNNA1-215ENST00000519309 SLC22A20A6NK97 555 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 E7ESA3 106 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 OR10H2O60403 315 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 PPM1BO75688 479 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 CBR3O75828 277 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 SIX3O95343 332 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 GPR75O95800 540 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 TTC4O95801 387 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 PLAUP00749 431 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 DANCRP0C864 163 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 EPORP19235 508 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 GPX3P22352 226 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 SSTR4P31391 388 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 ACVR1BP36896 505 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 BUD31P41223 144 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 RPS13P62277 151 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 OCRLQ01968 901 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 SRYQ05066 204 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 C2orf54Q08AI8 447 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 LAPTM5Q13571 262 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 DOC2AQ14183 400 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 SETDB1Q15047 1291 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 TRADDQ15628 312 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 TSNQ15631 228 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 AP5B1Q2VPB7 878 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 C18orf21Q32NC0 220 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 KBTBD12Q3ZCT8 623 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 PAGE2BQ5JRK9 111 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 GPR180Q86V85 440 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 LAS2Q8IYD9 372 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 NKAPQ8N5F7 415 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 ZNF615Q8N8J6 731 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 GBP7Q8N8V2 638 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 CNEP1R1Q8N9A8 125 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 WDSUB1Q8N9V3 476 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 FBXO36Q8NEA4 188 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 ZC3HAV1LQ96H79 300 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 ZNF845Q96IR2 970 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 MCMBPQ9BTE3 642 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 ZNF717Q9BY31 904 aaPredicted RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 PHACTR1Q9C0D0 580 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 OR10A4Q9H209 315 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 METTL7AQ9H8H3 244 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 RNF122Q9H9V4 155 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 GALNT9Q9HCQ5 603 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 PPANQ9NQ55 473 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 GRHL1Q9NZI5 618 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 LAMP3Q9UQV4 416 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 VWA7Q9Y334 891 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 MRPS18CQ9Y3D5 142 aaKnown RBP7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 ZNF175Q9Y473 711 aa7.57□□□□□ -1.2
CTNNA1-215ENST00000519309 PRAMEF25A6NGN4 478 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 EFCAB8A8MWE9 144 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 CXorf49A8MYA2 514 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 PLPP1O14494 284 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 CLGNO14967 610 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 RAD51CO43502 376 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 ICOSLGO75144 302 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 PRKRAO75569 313 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 IGHV4-39P01824 125 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 SOD3P08294 240 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 SLC35E2BP0CK96 405 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 SLC35E2P0CK97 266 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 NR2F6P10588 404 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 TBXA2RP21731 343 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 TLX1P31314 330 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 STARP49675 285 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 TAS2R39P59534 338 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 VLDLRP98155 873 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 PDIA2Q13087 525 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 SLAMF1Q13291 335 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 TGFBIQ15582 683 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 PDK4Q16654 411 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 CDKL4Q5MAI5 379 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 KHDRBS2Q5VWX1 349 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 HLA-DQA1Q5Y7H0 255 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 C18orf63Q68DL7 685 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 MRM1Q6IN84 353 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 DNAJC14Q6Y2X3 702 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 FRA10AC1Q70Z53 315 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 P4HA3Q7Z4N8 544 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 ZC3HC1Q86WB0 502 aaKnown RBP7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 GALNT12Q8IXK2 581 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 PRR22Q8IZ63 422 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 PDIK1LQ8N165 341 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 DOK4Q8TEW6 326 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 RNF138Q8WVD3 245 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 ANKRD49Q8WVL7 239 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 AKAP1Q92667 903 aaKnown RBP eCLIP7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 FBXW5Q969U6 566 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 REPS1Q96D71 796 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 SFXN2Q96NB2 322 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 NODALQ96S42 347 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 NAT9Q9BTE0 207 aa7.56□□□□□ -1.2
CTNNA1-215ENST00000519309 NXF5Q9H1B4 397 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms