RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ZNF551Q7Z340 670 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-219ENST00000518824 WDR53Q7Z5U6 358 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-219ENST00000518824 GHDCQ8N2G8 530 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 ZNF781Q8N8C0 355 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 ANKRD42Q8N9B4 389 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 FAM76AQ8TAV0 307 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 RELTQ969Z4 430 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 PGM2Q96G03 612 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 CCDC120Q96HB5 630 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 PPP1R36Q96LQ0 422 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 BBS4Q96RK4 519 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 NODALQ96S42 347 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 SORT1Q99523 831 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 FAM173AQ9BQD7 235 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 C1orf50Q9BV19 199 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 SSU72Q9NP77 194 aaKnown RBP12.23□□□□□ -0.45
VEGFA-219ENST00000518824 ENTPD4Q9Y227 616 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 DNAJC13O75165 2243 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 C2orf72A6NCS6 295 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 CCL21O00585 134 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 ADAM10O14672 748 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 PEX11AO75192 247 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 SERPINE1P05121 402 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 ABCB1P08183 1280 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-219ENST00000518824 CT45A8P0DMV1 189 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 CT45A9P0DMV2 189 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 BCKDHAP12694 445 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 MC3RP41968 323 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 NCBP2P52298 156 aaKnown RBP eCLIP12.22□□□□□ -0.45
VEGFA-219ENST00000518824 ADORA2A-AS1P86434 159 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 CDSNQ15517 529 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 CT45A2Q5DJT8 189 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 FNDC7Q5VTL7 733 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 TMEM107Q6UX40 140 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 DOLPP1Q86YN1 238 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 FAM9CQ8IZT9 166 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 TAGAPQ8N103 731 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 FBXW8Q8N3Y1 598 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 OR4N2Q8NGD1 307 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 SPPL2AQ8TCT8 520 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 NTNG2Q96CW9 530 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 OMA1Q96E52 524 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 MAGED4Q96JG8 741 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 LCORQ96JN0 433 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-219ENST00000518824 VSTM2LQ96N03 204 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 AMDHD1Q96NU7 426 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 ZDHHC11Q9H8X9 412 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 FOLH1BQ9HBA9 442 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 TMBIM4Q9HC24 238 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 EML4Q9HC35 981 aaKnown RBP12.22□□□□□ -0.45
VEGFA-219ENST00000518824 MIEF1Q9NQG6 463 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 PLSCR2Q9NRY7 297 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 TAS2R7Q9NYW3 318 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 PLEKHB1Q9UF11 243 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-219ENST00000518824 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.22□□□□□ -0.45
VEGFA-219ENST00000518824 DOPEY1Q5JWR5 2465 aa12.22□□□□□ -0.45
VEGFA-219ENST00000518824 SPTBN1Q01082 2364 aaKnown RBP12.22□□□□□ -0.45
VEGFA-219ENST00000518824 NBPF19A0A087WUL8 3843 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 PCNX1Q96RV3 2341 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 A0A1B0GUH1 482 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 C17orf51A8MQB3 221 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 TM9SF1O15321 606 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 UGT2B11O75310 529 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 HSPA4LO95757 839 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 CHEK2O96017 543 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 NEFHP12036 1026 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 GP1BBP13224 206 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 PTGDSP41222 190 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 PPICP45877 212 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 GSTM5P46439 218 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 CDK9P50750 372 aaKnown RBP12.21□□□□□ -0.45
VEGFA-219ENST00000518824 ABCE1P61221 599 aaKnown RBP12.21□□□□□ -0.45
VEGFA-219ENST00000518824 RPS6KA2Q15349 733 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 PDCD2Q16342 344 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-219ENST00000518824 EMC4Q5J8M3 183 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 C6orf136Q5SQH8 315 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 GK5Q6ZS86 529 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 LIX1Q8N485 282 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 RPRMLQ8N4K4 120 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 C17orf47Q8NEP4 570 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 PPP1R14CQ8TAE6 165 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 MGARPQ8TDB4 240 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 DIO2Q92813 273 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 HGDQ93099 445 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 TMBIM1Q969X1 311 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 ARL8AQ96BM9 186 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 TLCD1Q96CP7 247 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 METTL2AQ96IZ6 378 aaKnown RBP12.21□□□□□ -0.45
VEGFA-219ENST00000518824 JSRP1Q96MG2 331 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-219ENST00000518824 CCT7Q99832 543 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 PAIP2Q9BPZ3 127 aaKnown RBP12.21□□□□□ -0.45
VEGFA-219ENST00000518824 REEP4Q9H6H4 257 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 IL1RL2Q9HB29 575 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 GIMAP4Q9NUV9 329 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 GPR55Q9Y2T6 319 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-219ENST00000518824 ACTL7BQ9Y614 415 aa12.21□□□□□ -0.45
VEGFA-219ENST00000518824 NCOA6Q14686 2063 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-219ENST00000518824 TMEM120BA0PK00 339 aa12.2□□□□□ -0.46
VEGFA-219ENST00000518824 UPK1AO00322 258 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms