RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 LIME1Q9H400 295 aa13.33□□□□□ -0.28
SCARNA20.5-201ENST00000516991 NMRK1Q9NWW6 199 aa13.33□□□□□ -0.28
SCARNA20.5-201ENST00000516991 HRNRQ86YZ3 2850 aaPredicted RBP13.33□□□□□ -0.28
SCARNA20.5-201ENST00000516991 MAP1AP78559 2803 aaPredicted RBP13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 KDM4EB2RXH2 506 aaPredicted RBP13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ERN1O75460 977 aaKnown RBP13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 OTCP00480 354 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 RAF1P04049 648 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 INHBAP08476 426 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 TMIGD3P0DMS9 266 aaPredicted RBP13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 COL6A2P12110 1019 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 S1PR1P21453 382 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 MAGEA12P43365 314 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 SERPINB9P50453 376 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 CKAP4Q07065 602 aaKnown RBP13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 PLCXD2Q0VAA5 305 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 TRADDQ15628 312 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 NNATQ16517 81 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 PRICKLE4Q2TBC4 344 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 DCST1Q5T197 706 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 C8orf74Q6P047 294 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ENPP6Q6UWR7 440 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 HGDQ93099 445 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 KLHL29Q96CT2 875 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 OMA1Q96E52 524 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 LCORQ96JN0 433 aaPredicted RBP13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 FAIM2Q9BWQ8 316 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ITPAQ9BY32 194 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ACBD3Q9H3P7 528 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 BRF2Q9HAW0 419 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ZBTB26Q9HCK0 441 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ZDHHC18Q9NUE0 388 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 MAT2BQ9NZL9 334 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 KLRF1Q9NZS2 232 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 XPR1Q9UBH6 696 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 PRODH2Q9UF12 536 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 BCAP29Q9UHQ4 241 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 SNX6Q9UNH7 406 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 SLC12A4Q9UP95 1085 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 DTX4Q9Y2E6 619 aa13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 FLNAP21333 2647 aaKnown RBP13.32□□□□□ -0.28
SCARNA20.5-201ENST00000516991 KIAA1549Q9HCM3 1950 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 PRAMEF25A6NGN4 478 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ERAL1O75616 437 aaKnown RBP13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 RPS17P08708 135 aaKnown RBP13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 CPN1P15169 458 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 FOSL1P15407 271 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 NAGLUP54802 743 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ETF1P62495 437 aaKnown RBP13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 PSPHP78330 225 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 FOXD4Q12950 439 aaPredicted RBP13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 MILR1Q7Z6M3 343 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 PLD6Q8N2A8 252 aaKnown RBP13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 OR4F6Q8NGB9 312 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 SLC44A1Q8WWI5 657 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 NSUN5Q96P11 429 aaKnown RBP13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 TM9SF2Q99805 663 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 LRRC1Q9BTT6 524 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 SFXN3Q9BWM7 321 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 FUT8Q9BYC5 575 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 OR2B2Q9GZK3 357 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 TSPYL1Q9H0U9 437 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 NINJ2Q9NZG7 142 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 JKAMPQ9P055 326 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ZNF639Q9UID6 485 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 CES1P1Q9UKY3 287 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ZNF780BQ9Y6R6 833 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 MED12Q93074 2177 aa13.31□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ESYT3A0FGR9 886 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 FRG2CA6NGY1 282 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 H0Y3Z8 333 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 TO15178 435 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ABCB7O75027 752 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ICOSLGO75144 302 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 CBR3O75828 277 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 DRD5P21918 477 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 CNTFP26441 200 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 FEN1P39748 380 aaKnown RBP13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 PPICP45877 212 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 TRA2BP62995 288 aaKnown RBP13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 EEF1A1P68104 462 aaKnown RBP13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 MGAT2Q10469 447 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 GALNT1Q10472 559 aaPredicted RBP13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 EXOSC7Q15024 291 aaKnown RBP13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 SGO1Q5FBB7 561 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 EEF1A1P5Q5VTE0 462 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 FAM111BQ6SJ93 734 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 YRDCQ86U90 279 aaKnown RBP13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 RELL1Q8IUW5 271 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 GBP7Q8N8V2 638 aaPredicted RBP13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 C9orf106Q8NAJ2 232 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 OR14L1PQ8NHC6 308 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 SELENOMQ8WWX9 145 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 CTHRC1Q96CG8 243 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 ERP27Q96DN0 273 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 NODALQ96S42 347 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 MRPL57Q9BQC6 102 aaKnown RBP13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 YIPF4Q9BSR8 244 aa13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 MRPL46Q9H2W6 279 aaKnown RBP13.3□□□□□ -0.28
SCARNA20.5-201ENST00000516991 EPB41L4BQ9H329 900 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms