RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TRA2BP62995 288 aaKnown RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RPL38P63173 70 aaKnown RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RAE1P78406 368 aaKnown RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RHAGQ02094 409 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TNFRSF17Q02223 184 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CHAF1BQ13112 559 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 HEPACAMQ14CZ8 416 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 KIAA0040Q15053 153 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TBR1Q16650 682 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ATP6AP1LQ52LC2 224 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RFTN2Q52LD8 501 aaPredicted RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SFT2D3Q587I9 215 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C6orf136Q5SQH8 315 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NDUFAF5Q5TEU4 345 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 IRAK1BP1Q5VVH5 260 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 IL23RQ5VWK5 629 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NOXRED1Q6NXP6 359 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TMEM205Q6UW68 189 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 QSOX2Q6ZRP7 698 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FAM47EQ6ZV65 393 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LANCL3Q6ZV70 420 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MED25Q71SY5 747 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NDUFAF7Q7L592 441 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ANKRD37Q7Z713 158 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MRGPREQ86SM8 312 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TMEM132CQ8N3T6 1108 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ZBTB34Q8NCN2 500 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C7orf57Q8NEG2 295 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OR11G2Q8NGC1 345 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OR4K14Q8NGD5 310 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OR2T11Q8NH01 316 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FAM76AQ8TAV0 307 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ADAMTS17Q8TE56 1095 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 DOK4Q8TEW6 326 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C16orf78Q8WTQ4 265 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 APOBEC4Q8WW27 367 aaKnown RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 GFM2Q969S9 779 aaKnown RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NACC2Q96BF6 587 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PPWD1Q96BP3 646 aaKnown RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C19orf60Q96EN9 201 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 METTL2AQ96IZ6 378 aaKnown RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C3orf30Q96M34 536 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LPAR4Q99677 370 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CCT7Q99832 543 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PRORYQ9H606 182 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ZNF160Q9HCG1 818 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SLCO1B3Q9NPD5 702 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 NECTIN3Q9NQS3 549 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SIRT5Q9NXA8 310 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TEX10Q9NXF1 929 aaPredicted RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BAIAP2L1Q9UHR4 511 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FBXL4Q9UKA2 621 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 UTS2RQ9UKP6 389 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PSME2Q9UL46 239 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 EIF3LQ9Y262 564 aaKnown RBP5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MMACHCQ9Y4U1 282 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ZNF780BQ9Y6R6 833 aa5.42□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MAP1BP46821 2468 aaKnown RBP5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FER1L5A0AVI2 2057 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LOC102723996A0A087X1L8 192 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 GOLGA8QA0A0J9YX86 632 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 GOLGA8OA6NCC3 632 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TRPC5OSA6NMA1 111 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 A8MUI8 341 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C17orf105B2RV13 164 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TCP11X1B4DZS4 312 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 GOLGA8NF8WBI6 632 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SLCO1B7G3V0H7 640 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PCDH17O14917 1159 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LSM1O15116 133 aaKnown RBP5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 HDAC3O15379 428 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FGF17O60258 216 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OR10H2O60403 315 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 VPS4BO75351 444 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 DNAJB5O75953 348 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SEC24DO94855 1032 aaPredicted RBP5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LRATO95237 230 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 HPP00738 406 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 JUNP05412 331 aaKnown RBP5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CYC1P08574 325 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 IL3P08700 152 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 COX6A1P12074 109 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BCKDHAP12694 445 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ICAM2P13598 275 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 LBPP18428 481 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RHCEP18577 417 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PRPH2P23942 346 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PPP2R1BP30154 601 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FEN1P39748 380 aaKnown RBP5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RHDQ02161 417 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 FOLH1Q04609 750 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 AIMP2Q13155 320 aaKnown RBP5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BIKQ13323 160 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RAPSNQ13702 412 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SERTAD2Q14140 314 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TRIM25Q14258 630 aaKnown RBP5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MYBPC3Q14896 1274 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PCOLCEQ15113 449 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BTBD16Q32M84 506 aa5.41□□□□□ -1.54
SCARNA6.1-201ENST00000516989 DCAF10Q5QP82 559 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms