RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 TUBA1AQ71U36 451 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 UTS2BQ765I0 119 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MON1BQ7L1V2 547 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 G2E3Q7L622 706 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC26A9Q7LBE3 791 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 BHLHA15Q7RTS1 189 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF367Q7RTV3 350 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ERASQ7Z444 233 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GOLGA7Q7Z5G4 137 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARHGAP22Q7Z5H3 698 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CPEB2Q7Z5Q1 589 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SNX20Q7Z614 316 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMPRSS11BQ86T26 416 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIAA1328Q86T90 577 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LINC00523Q86TU6 105 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRIM74Q86UV6 250 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRIM73Q86UV7 250 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SATL1Q86VE3 508 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FJX1Q86VR8 437 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RANBP3LQ86VV4 465 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 P2RY8Q86VZ1 359 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PARGQ86W56 976 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LONP2Q86WA8 852 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPBP1Q86WP2 473 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC25Q86WR0 208 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 C17orf64Q86WR6 236 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SFR1Q86XK3 245 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NUDCD3Q8IVD9 361 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC50Q8IVM0 306 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 VSTM4Q8IW00 320 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM114A1Q8IWE2 563 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPALPP1Q8IXQ4 340 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 C12orf56Q8IXR9 622 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC65Q8IXS2 484 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MB21D2Q8IYB1 491 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TDHQ8IZJ6 230 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC38A6Q8IZM9 456 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 DSELQ8IZU8 1212 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 APCDD1Q8J025 514 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LGI2Q8N0V4 545 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM58AQ8N1B3 248 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GABRG1Q8N1C3 465 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 BEST3Q8N1M1 668 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GTPBP8Q8N3Z3 284 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 C17orf78Q8N4C9 275 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RFLNBQ8N5W9 214 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CPSF7Q8N684 471 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PQLC3Q8N755 202 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ARL14EPQ8N8R7 260 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 BMPERQ8N8U9 685 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NRACQ8N912 160 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 Q8N9G6 341 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ASCC1Q8N9N2 400 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GATSQ8NAP1 163 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FNDC5Q8NAU1 212 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SMYD1Q8NB12 490 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MLKLQ8NB16 471 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FBXL13Q8NEE6 735 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 C7orf57Q8NEG2 295 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM83FQ8NEG4 500 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZNF548Q8NEK5 533 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 C17orf47Q8NEP4 570 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPRC5AQ8NFJ5 357 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RDM1Q8NG50 284 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR7G2Q8NG99 324 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR5AU1Q8NGC0 362 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR4K1Q8NGD4 311 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR4K14Q8NGD5 310 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR5T3Q8NGG3 340 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR6M1Q8NGM8 313 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR5M8Q8NGP6 311 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR10Q1Q8NGQ4 319 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR13F1Q8NGS4 319 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR2AJ1Q8NGZ0 328 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR6S1Q8NH40 331 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR4L1Q8NH43 312 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDR36Q8NI36 951 aaKnown RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANGPTL6Q8NI99 470 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCNG3Q8TAE7 436 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GADD45GIP1Q8TAE8 222 aaPredicted RBP0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 FAM76AQ8TAV0 307 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 NDNFQ8TB73 568 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 M1APQ8TC57 530 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LKAAEAR1Q8TD35 194 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 DTX3LQ8TDB6 740 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 CD300LFQ8TDQ1 290 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GRHL3Q8TE85 626 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF128Q8TEB7 428 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPX8Q8TED1 209 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 WFIKKN2Q8TEU8 576 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SCFD1Q8WVM8 642 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 MAIP1Q8WWC4 291 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 ASZ1Q8WWH4 475 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 LIPHQ8WWY8 451 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM37Q8WXS4 190 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 IRGQQ8WZA9 623 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SMPDL3BQ92485 455 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRIB2Q92519 343 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 PIGCQ92535 297 aa0.53□□□□□ -2.32
RNU4-54P-201ENST00000516428 SUSD6Q92537 303 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms