RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CD96P40200 585 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 RPIAP49247 311 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 FGL1Q08830 312 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 ACSM2AQ08AH3 577 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 SLC36A2Q495M3 483 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 ACSM2BQ68CK6 577 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 ZNF772Q68DY9 489 aaPredicted RBP12.13□□□□□ -0.47
SMAD1-215ENST00000515385 NCEH1Q6PIU2 408 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 LYPD4Q6UWN0 246 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 ANGPTL8Q6UXH0 198 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 SLC36A4Q6YBV0 504 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 MACC1Q6ZN28 852 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 SPATA2LQ8IUW3 424 aaPredicted RBP12.13□□□□□ -0.47
SMAD1-215ENST00000515385 PDZD9Q8IXQ8 264 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 HSD17B8Q92506 261 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 KLRG1Q96E93 195 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 RNFT2Q96EX2 444 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 LRR1Q96L50 414 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 DPH7Q9BTV6 452 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 C1QTNF6Q9BXI9 259 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 METTL17Q9H7H0 456 aaPredicted RBP12.13□□□□□ -0.47
SMAD1-215ENST00000515385 C1GALT1Q9NS00 363 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 ARL15Q9NXU5 204 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 ACTR10Q9NZ32 417 aa12.13□□□□□ -0.47
SMAD1-215ENST00000515385 COL4A5P29400 1685 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 TREHO43280 583 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 ARAFP10398 606 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 IDSP22304 550 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 IGFBP6P24592 240 aaPredicted RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 AKR1D1P51857 326 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 ZP1P60852 638 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 ZXDBP98169 803 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 EFNB1P98172 346 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 DYRK1AQ13627 763 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 MINDY4Q4G0A6 757 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 PDSS1Q5T2R2 415 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 IDNKQ5T6J7 187 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 LIPJQ5W064 366 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 SERPINA9Q86WD7 417 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 GPR135Q8IZ08 494 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 STPG2Q8N412 459 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 SPICQ8N5J4 248 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 ZNF485Q8NCK3 441 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 FAM71CQ8NEG0 241 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 MNTQ99583 582 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 GAL3ST1Q99999 423 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 C19orf43Q9BQ61 176 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 ABCG4Q9H172 646 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 C11orf49Q9H6J7 331 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 IL17CQ9P0M4 197 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 SCML2Q9UQR0 700 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 RP2O75695 350 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 H1F0P07305 194 aaKnown RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 GIPP09681 153 aaPredicted RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 HIST1H2AGP0C0S8 130 aaPredicted RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 TFPIP10646 304 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 HIST1H2ADP20671 130 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 NFYAP23511 347 aaPredicted RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 RPS12P25398 132 aaKnown RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 ELAVL4P26378 380 aaKnown RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 RORAP35398 523 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 RPL35P42766 123 aaKnown RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 SLC6A12P48065 614 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 PGFP49763 221 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 MEOX2P50222 304 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 RAP2BP61225 183 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 TMEM44Q2T9K0 475 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 SPDYE7PQ495Y7 208 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 COX20Q5RI15 118 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 HIST2H2AA3Q6FI13 130 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 PGBD2Q6P3X8 592 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 BAIAP2L2Q6UXY1 529 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 BCDIN3DQ7Z5W3 292 aaKnown RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 GPR26Q8NDV2 337 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 FGF11Q92914 225 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 C11orf24Q96F05 449 aaPredicted RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 PAWRQ96IZ0 340 aaKnown RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 HIST1H2AJQ99878 128 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 SLC35A5Q9BS91 424 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 YIPF4Q9BSR8 244 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 DNTTIP1Q9H147 329 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 BRD9Q9H8M2 597 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 BIN3Q9NQY0 253 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 DNAJC11Q9NVH1 559 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 GPATCH2Q9NW75 528 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 SPATA6Q9NWH7 488 aaPredicted RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 RHCGQ9UBD6 479 aa12.12□□□□□ -0.47
SMAD1-215ENST00000515385 FNDC3AQ9Y2H6 1198 aaKnown RBP12.12□□□□□ -0.47
SMAD1-215ENST00000515385 MTMR11A4FU01 709 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 ZNF593O00488 134 aaPredicted RBP12.11□□□□□ -0.47
SMAD1-215ENST00000515385 PRRG1O14668 218 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 GNB5O14775 395 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 CNMDO75829 334 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 PLATP00750 562 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 LIMS3P0CW19 117 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 LIMS4P0CW20 117 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 MMP15P51511 669 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 SMSP52788 366 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 GRIN2CQ14957 1233 aa12.11□□□□□ -0.47
SMAD1-215ENST00000515385 TAPT1Q6NXT6 567 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms