RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 APOOQ9BUR5 198 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 ZBP1Q9H171 429 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 AMBNQ9NP70 447 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 ABCC13Q9NSE7 274 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 CNOT2Q9NZN8 540 aaKnown RBP3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 PLA2G4CQ9UP65 541 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 PIN4Q9Y237 131 aaKnown RBP3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 TRAV9-2A0A087WT02 112 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 RNF103-CHMP3A0A140T963 221 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 KRT87PA6NCN2 255 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 E9PAM4 449 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 H3BMH7 237 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 BUB1O43683 1085 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 STK17BO94768 372 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 KBTBD11O94819 623 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 GOT2P00505 430 aaKnown RBP3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 GP9P14770 177 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 PTGER3P43115 390 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 MAGEA4P43358 317 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 ATXN3P54252 364 aaPredicted RBP3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 ZNF33BQ06732 778 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 NME3Q13232 169 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 C15orf32Q32M92 178 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 LRIT3Q3SXY7 679 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 SPINK14Q6IE38 97 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 ZCCHC12Q6PEW1 402 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 CNSTQ6PJW8 725 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 HPS6Q86YV9 775 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 ERC1Q8IUD2 1116 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 KDM8Q8N371 416 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 HDDC3Q8N4P3 179 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 TYMSOSQ8TAI1 123 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 LHX4Q969G2 390 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 MCCC1Q96RQ3 725 aaPredicted RBP3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 FAM173AQ9BQD7 235 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 NDUFAF3Q9BU61 184 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 HSD3B7Q9H2F3 369 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 ESM1Q9NQ30 184 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 CIDEBQ9UHD4 219 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 PURGQ9UJV8 347 aaKnown RBP3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 SLC9A8Q9Y2E8 581 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 PLEKHA6Q9Y2H5 1048 aa3.95□□□□□ -1.78
HMGCS1-207ENST00000514610 IGHV3OR16-12A0A075B7B8 117 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 A0A1W2PQ72 361 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 ERI2A8K979 691 aaKnown RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 SAP18O00422 153 aaKnown RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 EI24O14681 340 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 CFLARO15519 480 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 PDE5AO76074 875 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 ECDO95905 644 aaPredicted RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 WNT2P09544 360 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 RPA1P27694 616 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 PRDX2P32119 198 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 RFC2P35250 354 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 POU3F4P49335 361 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 SLC7A2P52569 658 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 IL1RL1Q01638 556 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 CRMP1Q14194 572 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 KARSQ15046 597 aaKnown RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 ZNF239Q16600 458 aaKnown RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 ACSF3Q4G176 576 aaPredicted RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 IL23RQ5VWK5 629 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 SEL1L3Q68CR1 1132 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 STOX1Q6ZVD7 989 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 RANBP3LQ86VV4 465 aaPredicted RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 NAXDQ8IW45 347 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 SLC22A18ASQ8N1D0 253 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 RNF148Q8N7C7 305 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 MINDY2Q8NBR6 621 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 DLX4Q92988 240 aaPredicted RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 RBM18Q96H35 190 aaKnown RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 PIWIL1Q96J94 861 aaKnown RBP3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 TSPY26PQ9H489 355 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 CENPMQ9NSP4 180 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 SOHLH2Q9NX45 425 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 MBD2Q9UBB5 411 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 UBE4BO95155 1302 aa3.94□□□□□ -1.78
HMGCS1-207ENST00000514610 PDLIM1O00151 329 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 SRPX2O60687 465 aaPredicted RBP3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 SRSF10O75494 262 aaKnown RBP3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 TOXO94900 526 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 PTBP3O95758 552 aaKnown RBP3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 PIGRP01833 764 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 FUT1P19526 365 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 BRCC3P46736 316 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 ARHGDIAP52565 204 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 IST1P53990 364 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 SLC26A5P58743 744 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 TRA2BP62995 288 aaKnown RBP3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 PDIA5Q14554 519 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 SLC22A6Q4U2R8 563 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 ISLR2Q6UXK2 745 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 GOLGA7Q7Z5G4 137 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 P2RY8Q86VZ1 359 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 GPBP1Q86WP2 473 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 SLC39A11Q8N1S5 342 aa3.93□□□□□ -1.78
HMGCS1-207ENST00000514610 ARFGAP2Q8N6H7 521 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms