RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 YIPF4Q9BSR8 244 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 BHLHE41Q9C0J9 482 aaPredicted RBP10.71□□□□□ -0.7
TCOF1-211ENST00000513346 CST11Q9H112 138 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 SFXN1Q9H9B4 322 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 MRPS30Q9NP92 439 aaKnown RBP10.71□□□□□ -0.7
TCOF1-211ENST00000513346 DLGAP4Q9Y2H0 992 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 MN1Q10571 1320 aaPredicted RBP10.71□□□□□ -0.7
TCOF1-211ENST00000513346 CNTRLQ7Z7A1 2325 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 MYH9P35579 1960 aaKnown RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 A0A1W2PPL8 197 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 C1orf196B1AJZ1 125 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 TEX46H3BTG2 121 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 MUSKO15146 869 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 POP7O75817 140 aaKnown RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ALPPL2P10696 532 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 HSD3B1P14060 373 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 HSD3B2P26439 372 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 APEX1P27695 318 aaKnown RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 BMPR1AP36894 532 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CLCNKAP51800 687 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 AFF1P51825 1210 aaKnown RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 AIMP2Q13155 320 aaKnown RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ASAH1Q13510 395 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 XKR4Q5GH76 650 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 RTP2Q5QGT7 225 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 GPRC6AQ5T6X5 926 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 FBXO42Q6P3S6 717 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ZSCAN1Q8NBB4 408 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 OR6K6Q8NGW6 343 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 MAP6Q96JE9 813 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 PSKH2Q96QS6 385 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CDCA3Q99618 268 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF350Q9GZX5 532 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CLMPQ9H6B4 373 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 GALNT9Q9HCQ5 603 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ACTR10Q9NZ32 417 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF670-ZNF695F2Z2N8 137 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CD2P06729 351 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 PRSS56P0CW18 603 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ATP1B2P14415 290 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 PCGF2P35227 344 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ETV3P41162 512 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 NCBP2P52298 156 aaKnown RBP eCLIP10.7□□□□□ -0.71e-8■■□□□ 13.6
TCOF1-211ENST00000513346 VSX2P58304 361 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF155Q12901 538 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 SP140Q13342 867 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CLVS2Q5SYC1 327 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 HACD4Q5VWC8 232 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 PRAMEF13Q5VWM6 474 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 USP51Q70EK9 711 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 NAGSQ8N159 534 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 C3orf58Q8NDZ4 430 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 OR52N2Q8NGI0 321 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 SLC22A18Q96BI1 424 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ARMC5Q96C12 935 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 GPR78Q96P69 363 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 NEDD4LQ96PU5 975 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CD180Q99467 661 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 C7orf50Q9BRJ6 194 aaKnown RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 OR51B5Q9H339 312 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ARNT2Q9HBZ2 717 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 IFT46Q9NQC8 304 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 PLSCR3Q9NRY6 295 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 NLGN3Q9NZ94 848 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 MRPL15Q9P015 296 aaKnown RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 MEMO1Q9Y316 297 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 A0A1B0GUL6 1792 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 JUPP14923 745 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 HSD17B2P37059 387 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CDKN2CP42773 168 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 GZMKP49863 264 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CEBPGP53567 150 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 POU6F2P78424 691 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CHRNEQ04844 493 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 FGL1Q08830 312 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 FCN2Q15485 313 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 SCGB2B2Q4G0G5 96 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 PRSS58Q8IYP2 241 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF676Q8N7Q3 588 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 TRMT10AQ8TBZ6 339 aaKnown RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 IGSF8Q969P0 613 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 CPPED1Q9BRF8 314 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 B4GALT6Q9UBX8 382 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 TCRBV5S2A0A599 114 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF705EA8MWA4 302 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 SMLR1H3BR10 107 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 APOC1P02654 83 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 SCG5P05408 212 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 NDUFS1P28331 727 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 TIA1P31483 386 aaKnown RBP eCLIP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ITPRIPL2Q3MIP1 535 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 TMEM69Q5SWH9 247 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 KDM4DQ6B0I6 523 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF627Q7L945 461 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 LRRTM3Q86VH5 581 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 FAM86B1Q8N7N1 296 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 P2RY13Q9BPV8 354 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 PELOQ9BRX2 385 aaKnown RBP10.7□□□□□ -0.7
TCOF1-211ENST00000513346 OR6C2Q9NZP2 312 aa10.7□□□□□ -0.7
TCOF1-211ENST00000513346 DUXAA6NLW8 204 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms