RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 ERVK13-1Q9NX77 482 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 SAGE1Q9NXZ1 904 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 KNL1Q8NG31 2342 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 LRRC37AA6NMS7 1700 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 FADS1O60427 444 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 GKN3PP0CG01 181 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 ELOAQ14241 798 aaKnown RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 TBC1D25Q3MII6 688 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 SLC8B1Q6J4K2 584 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 RERGQ96A58 199 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 C3orf30Q96M34 536 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 BIRC8Q96P09 236 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 CRB3Q9BUF7 120 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 MARCH5Q9NX47 278 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 FZD4Q9ULV1 537 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 STUB1Q9UNE7 303 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 PRAMEF12O95522 483 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 PDYNP01213 254 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 GDI1P31150 447 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 PRR5P85299 388 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 GANABQ14697 944 aaKnown RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 DPY19L1Q2PZI1 675 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 BLOC1S3Q6QNY0 202 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 PAPD5Q8NDF8 572 aaKnown RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 KIAA1143Q96AT1 154 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 SGTBQ96EQ0 304 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 KLF16Q9BXK1 252 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 TAC3Q9UHF0 121 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 KLF15Q9UIH9 416 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 OARD1Q9Y530 152 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 TEX51A0A1B0GUA7 166 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 NPIPB15A6NHN6 443 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 NPC1O15118 1278 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 TNFSF12O43508 249 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 BDKRB2P30411 391 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 NDUFA6P56556 154 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ERVFC1P60507 584 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 RPS13P62277 151 aaKnown RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 IFI44LQ53G44 452 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 DCDC5Q6ZRR9 648 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ZNF367Q7RTV3 350 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 DCUN1D3Q8IWE4 304 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ST8SIA2Q92186 375 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 TMEM41AQ96HV5 264 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 SLC22A12Q96S37 553 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 MYNNQ9NPC7 610 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 NLKQ9UBE8 527 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ENSAO43768 121 aaKnown RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 KLKB1P03952 638 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 SGSHP51688 502 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 GRM2Q14416 872 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 CLINT1Q14677 625 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 HEPACAMQ14CZ8 416 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ODF4Q2M2E3 257 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 LETMD1Q6P1Q0 360 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 TCEAL8Q8IYN2 117 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 SLC22A15Q8IZD6 547 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ZNF514Q96K75 400 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 FOLH1BQ9HBA9 442 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 MAN2C1Q9NTJ4 1040 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ZNF891A8MT65 544 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ARAFP10398 606 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 AHCYP23526 432 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 CFL1P23528 166 aaKnown RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 HOXD9P28356 352 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 VIPR2P41587 438 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ZNF140P52738 457 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 GRIK2Q13002 908 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 PRAMEF14Q5SWL7 426 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 LRIF1Q5T3J3 769 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 DPY19L4Q7Z388 723 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 MAVSQ7Z434 540 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 CLEC14AQ86T13 490 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 SLC39A11Q8N1S5 342 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 LCN9Q8WX39 176 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 TFGQ92734 400 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 NUDT9Q9BW91 350 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 WDR26Q9H7D7 661 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 FN3KRPQ9HA64 309 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 FZD3Q9NPG1 666 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 DZANK1Q9NVP4 752 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 TNFRSF10DQ9UBN6 386 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 DOCK5Q9H7D0 1870 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 C20orf202A1L168 122 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 HTRA2O43464 458 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 TGOLN2O43493 480 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 CREG1O75629 220 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 MGST1P10620 155 aaKnown RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 PLEKHG7Q6ZR37 379 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 KBTBD6Q86V97 674 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 NRROSQ86YC3 692 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 SVBPQ8N300 66 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 OR10G2Q8NGC3 310 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 FIBINQ8TAL6 211 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 CPT1CQ8TCG5 803 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 PRICKLE1Q96MT3 831 aaPredicted RBP10.33□□□□□ -0.76
CPNE4-209ENST00000512055 SOHLH2Q9NX45 425 aa10.33□□□□□ -0.76
CPNE4-209ENST00000512055 ELOVL2Q9NXB9 296 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms