RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ARMC3Q5W041 872 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 FAM53AQ6NSI3 398 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 SUSD1Q6UWL2 747 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 ADCK2Q7Z695 626 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 BMPERQ8N8U9 685 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 STKLD1Q8NE28 680 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 OR11H4Q8NGC9 324 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 FAM76AQ8TAV0 307 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 PHLDA1Q8WV24 401 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 TMEM190Q8WZ59 177 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 FBXO17Q96EF6 278 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 OTUB1Q96FW1 271 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 RMND5BQ96G75 393 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 IL12RB2Q99665 862 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 ZNF559Q9BR84 538 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 UBAC1Q9BSL1 405 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 BBS2Q9BXC9 721 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 NFKBIZQ9BYH8 718 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 MIS12Q9H081 205 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 DHX33Q9H6R0 707 aaKnown RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 ZWILCHQ9H900 591 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CDH20Q9HBT6 801 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 ANAPC5Q9UJX4 755 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 KCNJ14Q9UNX9 436 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 GAB2Q9UQC2 676 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CSNK1G3Q9Y6M4 447 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 MYO18AQ92614 2054 aaKnown RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 NEDD4P46934 1319 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 DENND4CQ5VZ89 1909 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 ZGRF1Q86YA3 2104 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 PCLOQ9Y6V0 5065 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.12□□□□□ -1.912e-17■■■■■ 64.5
TOPBP1-208ENST00000511439 IGLV3-22A0A075B6J6 115 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 A0A1W2PPK0 400 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ANKRD61A6NGH8 418 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ANXA2P2A6NMY6 339 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 FAM86B1E9PN63 330 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 HIP1O00291 1037 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 E2F3O00716 465 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 MSH4O15457 936 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 AQP9O43315 295 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 LATO43561 262 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ACSL3O95573 720 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 CLPTM1O96005 669 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 NGFP01138 241 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 FAM86B2P0C5J1 330 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ODC1P11926 461 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 CA6P23280 308 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 AZGP1P25311 298 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 PSMA3P25788 255 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 SMSP52788 366 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 CRIP2P52943 208 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 MAZP56270 477 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ZFP36L1Q07352 338 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 VEZF1Q14119 521 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 EMC2Q15006 297 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 P2RY6Q15077 328 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ODF4Q2M2E3 257 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 DEFB133Q30KQ1 61 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 DEFB113Q30KQ7 82 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 KRT71Q3SY84 523 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 C1QTNF12Q5T7M4 302 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 CES4AQ5XG92 561 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ZNF776Q68DI1 518 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ARHGAP17Q68EM7 881 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 C11orf88Q6PI97 169 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 PPP1R21Q6ZMI0 780 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 TMEM25Q86YD3 366 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 CCAR2Q8N163 923 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 WDSUB1Q8N9V3 476 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 IQUBQ8NA54 791 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ACBD4Q8NC06 268 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 OR10T2Q8NGX3 314 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 LGALS12Q96DT0 336 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 THOC1Q96FV9 657 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 RMDN2Q96LZ7 410 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 SPAG5Q96R06 1193 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 CALN1Q9BXU9 219 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 LRRN3Q9H3W5 708 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 DNAJC4Q9NNZ3 241 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 FGF21Q9NSA1 209 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 ARGLU1Q9NWB6 273 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 FBXL12Q9NXK8 326 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 STMN3Q9NZ72 180 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 PILRAQ9UKJ1 303 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 PLEKHA6Q9Y2H5 1048 aa3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 MRPS18BQ9Y676 258 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-208ENST00000511439 CHD3Q12873 2000 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 PRAMEF26H0Y7S4 382 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 CCL21O00585 134 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 OLFM2O95897 454 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 PAK4O96013 591 aaPredicted RBP3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 EDN1P05305 212 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 IGHV4-31P0DP07 118 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 MBL2P11226 248 aaPredicted RBP3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 CCL4P13236 92 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 GNB3P16520 340 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 CHRNB4P30926 498 aa3.11□□□□□ -1.91
TOPBP1-208ENST00000511439 GP5P40197 560 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms