RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 SYTL3Q4VX76 610 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 NANOGNBQ7Z5D8 188 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 VN1R5Q7Z5H4 357 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 LIX1LQ8IVB5 337 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 NAGSQ8N159 534 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 TP53I13Q8NBR0 393 aaPredicted RBP12.15□□□□□ -0.46
HMGB2-205ENST00000511316 OR13H1Q8NG92 308 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 OR56A3Q8NH54 315 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 NR4A3Q92570 626 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 PPCDCQ96CD2 204 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 MYOCQ99972 504 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 GTPBP2Q9BX10 602 aaKnown RBP12.15□□□□□ -0.46
HMGB2-205ENST00000511316 UCK2Q9BZX2 261 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 GAREM1Q9H706 876 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 KLHL21Q9UJP4 597 aa12.15□□□□□ -0.46
HMGB2-205ENST00000511316 ANKRD34BA5PLL1 514 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 NPIPB15A6NHN6 443 aaPredicted RBP12.14□□□□□ -0.47
HMGB2-205ENST00000511316 MYL12BO14950 172 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ARHGEF9O43307 516 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 HCN1O60741 890 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 MFN2O95140 757 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 SPNP16150 400 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ERP29P30040 261 aaKnown RBP12.14□□□□□ -0.47
HMGB2-205ENST00000511316 CHI3L1P36222 383 aaPredicted RBP12.14□□□□□ -0.47
HMGB2-205ENST00000511316 B4GALNT1Q00973 533 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 CHRNEQ04844 493 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 EEF1A2Q05639 463 aaKnown RBP12.14□□□□□ -0.47
HMGB2-205ENST00000511316 PUM1Q14671 1186 aaKnown RBP eCLIP12.14□□□□□ -0.471e-41■■■□□ 17.2
HMGB2-205ENST00000511316 DDI2Q5TDH0 399 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 REEP3Q6NUK4 255 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 AGTRAPQ6RW13 159 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 KANSL1Q7Z3B3 1105 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 SLC7A5P1Q8MH63 180 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 VWA5B2Q8N398 1253 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 BTN2A2Q8WVV5 523 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ELMO1Q92556 727 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TMEM159Q96B96 161 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ZSCAN5AQ9BUG6 496 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 WRAP53Q9BUR4 548 aaKnown RBP12.14□□□□□ -0.47
HMGB2-205ENST00000511316 PRRG3Q9BZD7 231 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 C1GALT1Q9NS00 363 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 B4GALT6Q9UBX8 382 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 KLF15Q9UIH9 416 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ICKQ9UPZ9 632 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 CFAP20Q9Y6A4 193 aaKnown RBP12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TMEM131Q92545 1883 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 A8MX80 341 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TMEM229AB2RXF0 380 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 RGS5O15539 181 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TBX19O60806 448 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ALX3O95076 343 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ALPPP05187 535 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ZNF883P0CG24 379 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 C6P13671 934 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 UQCRC2P22695 453 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TGFBR1P36897 503 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 NR4A2P43354 598 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 MVDP53602 400 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 GNG2P59768 71 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 PTSQ03393 145 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 GAB1Q13480 694 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TAB1Q15750 504 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 BCL7AQ4VC05 210 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 KLHL22Q53GT1 634 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 PDZK1Q5T2W1 519 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 MZT2BQ6NZ67 158 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 RFLNAQ6ZTI6 216 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 DPPA4Q7L190 304 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TSPAN33Q86UF1 283 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 GALNT12Q8IXK2 581 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TRAM1L1Q8N609 369 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 AQP11Q8NBQ7 271 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 OR7G3Q8NG95 312 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 CDC26Q8NHZ8 85 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TTC9Q92623 222 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ZNF764Q96H86 408 aaPredicted RBP12.14□□□□□ -0.47
HMGB2-205ENST00000511316 COQ10AQ96MF6 247 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 OPALINQ96PE5 141 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 NIPSNAP1Q9BPW8 284 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 SRRQ9GZT4 340 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 MARCH7Q9H992 704 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 ERVMER34-1Q9H9K5 563 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 AHSPQ9NZD4 102 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 TBC1D24Q9ULP9 559 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 LSM2Q9Y333 95 aaKnown RBP12.14□□□□□ -0.47
HMGB2-205ENST00000511316 RBMX2Q9Y388 322 aaKnown RBP12.14□□□□□ -0.47
HMGB2-205ENST00000511316 DYRK1BQ9Y463 629 aa12.14□□□□□ -0.47
HMGB2-205ENST00000511316 NCOR2Q9Y618 2525 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 PIKFYVEQ9Y2I7 2098 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 FREM2Q5SZK8 3169 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 A0A1B0GTQ1 180 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 C5orf58C9J3I9 102 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 IL7P13232 177 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 GRK5P34947 590 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 IGFALSP35858 605 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 NUDT6P53370 316 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 ARPC4P59998 168 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 ANGPTL8Q6UXH0 198 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 CD300LDQ6UXZ3 194 aa12.13□□□□□ -0.47
HMGB2-205ENST00000511316 Q6ZSR6 202 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms