RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 RAB19A4D1S5 217 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 CASTOR2A6NHX0 329 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 F8VVB4 439 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 F8VWA3 439 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 I6L893 689 aaPredicted RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 BTN3A3O00478 584 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 FPGTO14772 594 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 SLC16A5O15375 505 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 COCHO43405 550 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PDE5AO76074 875 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 CCNB2O95067 398 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 NXPH3O95157 252 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 BAG3O95817 575 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PPIAL4FP0DN26 164 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 GOT1P17174 413 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PPP2R1BP30154 601 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 OTX1P32242 354 aaPredicted RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 NKX2-1P43699 371 aaPredicted RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 RPL21P46778 160 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 CASP4P49662 377 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 FHITP49789 147 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 METAP2P50579 478 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 NR0B1P51843 470 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 UBE2G2P60604 165 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 POLR2GP62487 172 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PAX5Q02548 391 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 CFHR3Q02985 330 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 SULT2A1Q06520 285 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 IL10RBQ08334 325 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 BST2Q10589 180 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PNRC1Q12796 327 aaPredicted RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 ILF2Q12905 390 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 EXOSC2Q13868 293 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 TRIP6Q15654 476 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 MRPL23Q16540 153 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 SLC5A12Q1EHB4 618 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 GGTA1PQ4G0N0 100 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 SYT14P1Q58G82 188 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 AARS2Q5JTZ9 985 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 TMEM31Q5JXX7 168 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 MANEAQ5SRI9 462 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 C20orf194Q5TEA3 1177 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 LIPJQ5W064 366 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 SNRNP48Q6IEG0 339 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 OR4F3Q6IEY1 312 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 UQCC3Q6UW78 93 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 DHRS13Q6UX07 377 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 NAPRTQ6XQN6 538 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 USP50Q70EL3 339 aaPredicted RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 G2E3Q7L622 706 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PAGE2Q7Z2X7 111 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 TBC1D10CQ8IV04 446 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 SYT14Q8NB59 555 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 CYB561A3Q8NBI2 242 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 SLC38A9Q8NBW4 561 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PROKR2Q8NFJ6 384 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 TTLQ8NG68 377 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 OR10Q1Q8NGQ4 319 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 FANK1Q8TC84 345 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 HCAR2Q8TDS4 363 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 CAPSLQ8WWF8 208 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 P3H4Q92791 437 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 CD101Q93033 1021 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 SLC38A4Q969I6 547 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PINX1Q96BK5 328 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PPP1R14BQ96C90 147 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 GRAMD2BQ96HH9 432 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 TGM7Q96PF1 710 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 TSSK3Q96PN8 268 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 ACCSQ96QU6 501 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 KRT12Q99456 494 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 TM6SF2Q9BZW4 377 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 ACTL8Q9H568 366 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PPP1R3EQ9H7J1 279 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 IL1RL2Q9HB29 575 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 RAVER2Q9HCJ3 691 aaKnown RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 CCNB1IP1Q9NPC3 277 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PXMP2Q9NR77 195 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 RBAKQ9NYW8 714 aaPredicted RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 NLGN3Q9NZ94 848 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 C1RLQ9NZP8 487 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 LHX3Q9UBR4 397 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 TTC7AQ9ULT0 858 aaPredicted RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 WDR83OSQ9Y284 106 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 PPIAL4AQ9Y536 164 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 NPTNQ9Y639 398 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 SIRT4Q9Y6E7 314 aaPredicted RBP3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 MROH7-TTC4A0A0A0MT08 1334 aa3.92□□□□□ -1.78
SMARCA5-202ENST00000508573 MTMR11A4FU01 709 aa3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 E9PMD0 336 aa3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 E9PQ18 207 aa3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 F8W810 466 aa3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 H0YIZ8 118 aa3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 SGK494L7N484 410 aa3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 M0R296 226 aa3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 CLDN5O00501 218 aa3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 TRAFD1O14545 582 aaPredicted RBP3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 TOR1AO14656 332 aa3.91□□□□□ -1.78
SMARCA5-202ENST00000508573 CHEK1O14757 476 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms