RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CPSF4O95639 269 aaKnown RBP11.89□□□□□ -0.51
TCOF1-210ENST00000506767 ALPPP05187 535 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 CAPN3P20807 821 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 MAP3K8P41279 467 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 PPICP45877 212 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 CCT3P49368 545 aaKnown RBP11.89□□□□□ -0.51
TCOF1-210ENST00000506767 DCAF7P61962 342 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 UBAP2LQ14157 1087 aaKnown RBP11.89□□□□□ -0.51
TCOF1-210ENST00000506767 MAPKAPK3Q16644 382 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 VPS26BQ4G0F5 336 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 TIGD2Q4W5G0 525 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 PIGGQ5H8A4 983 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 EXOSC6Q5RKV6 272 aaKnown RBP11.89□□□□□ -0.51
TCOF1-210ENST00000506767 ABHD17BQ5VST6 288 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 C16orf47Q6ZP98 133 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-210ENST00000506767 BEST3Q8N1M1 668 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 ANKS4BQ8N8V4 417 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 NUP43Q8NFH3 380 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 OR4A15Q8NGL6 344 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 SFXN5Q8TD22 340 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 GTF2H4Q92759 462 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 HAS2Q92819 552 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 MOAP1Q96BY2 351 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 MAGED4Q96JG8 741 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 INPP5KQ9BT40 448 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 CCDC106Q9BWC9 280 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 ITPAQ9BY32 194 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 RNF32Q9H0A6 362 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 MYLK2Q9H1R3 596 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 FOLH1BQ9HBA9 442 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 RYDENQ9NUL5 291 aaKnown RBP11.89□□□□□ -0.51
TCOF1-210ENST00000506767 PCDHGB4Q9UN71 923 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 GPR55Q9Y2T6 319 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-210ENST00000506767 ARL2BPQ9Y2Y0 163 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 YARS2Q9Y2Z4 477 aaKnown RBP11.89□□□□□ -0.51
TCOF1-210ENST00000506767 ZNF451Q9Y4E5 1061 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 TNRC6AQ8NDV7 1962 aaKnown RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 NBEAQ8NFP9 2946 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 FASNP49327 2511 aaKnown RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 A0A1W2PP18 115 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 WWP2O00308 870 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 NR5A2O00482 541 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 FCHO1O14526 889 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 NME6O75414 186 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 OR2J2O76002 312 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 ABCB1P08183 1280 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 ZCCHC18P0CG32 403 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 CT45A8P0DMV1 189 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 CT45A9P0DMV2 189 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 HOXB9P17482 250 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 DRD5P21918 477 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 UQCRC2P22695 453 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 PTPN6P29350 595 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 TRHRP34981 398 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 CDKN2CP42773 168 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 TRPC1P48995 793 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 PRR5P85299 388 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 PSG6Q00889 435 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 CT45A2Q5DJT8 189 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 ZCCHC12Q6PEW1 402 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 SLC2A7Q6PXP3 512 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 LYPD8Q6UX82 237 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 LINC00696Q6ZRV3 163 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 GK5Q6ZS86 529 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 MTDHQ86UE4 582 aaKnown RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 HPS6Q86YV9 775 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 SLC15A4Q8N697 577 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 ITCHQ96J02 903 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 LCORQ96JN0 433 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 MS4A4EQ96PG1 132 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 BTBD9Q96Q07 612 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 PANX1Q96RD7 426 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 GAL3ST4Q96RP7 486 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 RASL10BQ96S79 203 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 LMF2Q9BU23 707 aaKnown RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 NXF5Q9H1B4 397 aaKnown RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 EPS8L2Q9H6S3 715 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 RMND5AQ9H871 391 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 TRIM45Q9H8W5 580 aaPredicted RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 ZCCHC3Q9NUD5 404 aaKnown RBP11.88□□□□□ -0.51
TCOF1-210ENST00000506767 GPATCH2Q9NW75 528 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 TP53TG5Q9Y2B4 290 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 SNX8Q9Y5X2 465 aa11.88□□□□□ -0.51
TCOF1-210ENST00000506767 NUP214P35658 2090 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 FRG2CA6NGY1 282 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 TTC36A6NLP5 189 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 RFXANKO14593 260 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 TO15178 435 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 ERN1O75460 977 aaKnown RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 WDPCPO95876 746 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 PRB1P04280 392 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 HMGN2P05204 90 aaKnown RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 SNRPB2P08579 225 aaKnown RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 SFTPCP11686 197 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 SSR4P51571 173 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 NR0B1P51843 470 aaKnown RBP11.87□□□□□ -0.51
TCOF1-210ENST00000506767 PRKAG1P54619 331 aa11.87□□□□□ -0.51
TCOF1-210ENST00000506767 GAB1Q13480 694 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms