RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ZNF713Q8N859 430 aaPredicted RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 TMEM185AQ8NFB2 350 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 ZNF671Q8TAW3 534 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 VN1R17PQ8TDU5 208 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 TMEM37Q8WXS4 190 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 TMEM45BQ96B21 275 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 ZNF560Q96MR9 790 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 CCDC43Q96MW1 224 aaKnown RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 CCT8L2Q96SF2 557 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 CBWD1Q9BRT8 395 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 NLNQ9BYT8 704 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 DEFB126Q9BYW3 111 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 PNNQ9H307 717 aaKnown RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 TSPY26PQ9H489 355 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 RNF41Q9H4P4 317 aaPredicted RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 FAM124BQ9H5Z6 455 aaPredicted RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 MBD2Q9UBB5 411 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 LHX3Q9UBR4 397 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 B4GALT7Q9UBV7 327 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 PURGQ9UJV8 347 aaKnown RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 TDRKHQ9Y2W6 561 aaKnown RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 RNF115Q9Y4L5 304 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 TMEM89A2RUT3 159 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 SLC9B1P1A6NJY1 282 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 FAM220BPB1ANY3 271 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 K7ERI5 159 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 DDX39AO00148 427 aaKnown RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 STK17BO94768 372 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 PRAMEF12O95522 483 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 CT45A10P0DMU9 189 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 PTPN4P29074 926 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 OR1D4P47884 311 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 FNTAP49354 379 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 SLC7A2P52569 658 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 CASP9P55211 416 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 IGLV3-21P80748 117 aaPredicted RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 GALK2Q01415 458 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 PPP1R8Q12972 351 aaKnown RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 SMC1AQ14683 1233 aaKnown RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 ZKSCAN8Q15776 578 aaPredicted RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 ACSF3Q4G176 576 aaPredicted RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 DPY19L2P2Q6ZN68 376 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 PRSS48Q7RTY5 328 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 BNIPLQ7Z465 357 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 AMZ2Q86W34 360 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 SNX32Q86XE0 403 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 PYROXD2Q8N2H3 581 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 ZNF525Q8N782 197 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 EXOC6Q8TAG9 804 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 DLX4Q92988 240 aaPredicted RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 LHX4Q969G2 390 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 CCDC51Q96ER9 411 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 SERAC1Q96JX3 654 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 CNOT6LQ96LI5 555 aaKnown RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 C9orf85Q96MD7 179 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 TEX13AQ9BXU3 409 aaPredicted RBP2.09□□□□□ -2.07
GYPB-207ENST00000506679 IKZF5Q9H5V7 419 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 ALG9Q9H6U8 611 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 ESM1Q9NQ30 184 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 HPS4Q9NQG7 708 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 VNN3Q9NY84 501 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 COPS7AQ9UBW8 275 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 FAM153AQ9UHL3 310 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 RSPH14Q9UHP6 348 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 NTNG1Q9Y2I2 539 aa2.09□□□□□ -2.07
GYPB-207ENST00000506679 IGKV6D-41A0A0C4DH26 115 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 A0A0U1RRA0 63 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 TRABD2BA6NFA1 517 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 MFSD2BA6NFX1 497 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 CCER2I3L3R5 266 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 SLC17A2O00624 439 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 EI24O14681 340 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 RANBP6O60518 1105 aaKnown RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 KERAO60938 352 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 DUSP14O95147 198 aaKnown RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 KLK2P20151 261 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 OAS2P29728 719 aaKnown RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 MAGEA4P43358 317 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 SLC6A8P48029 635 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 ALDH3B2P48448 385 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 POU3F4P49335 361 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 ARHGDIBP52566 201 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 SLC25A1P53007 311 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 SRP54P61011 504 aaKnown RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 LRIT3Q3SXY7 679 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 PAN3Q58A45 887 aaKnown RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 FHL5Q5TD97 284 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 MARC1Q5VT66 337 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 RSBN1Q5VWQ0 802 aaPredicted RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 PLBD1Q6P4A8 553 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 CWC27Q6UX04 472 aaKnown RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 C2orf66Q6UXQ4 117 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 ADGRD2Q7Z7M1 963 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 ADAMTSL2Q86TH1 951 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 MLKLQ8NB16 471 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 MSANTD4Q8NCY6 345 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 ZNF397Q8NF99 534 aaPredicted RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 OR52E1Q8NGJ3 308 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 URGCPQ8TCY9 931 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms