RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 RXFP3Q9NSD7 469 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 STARD5Q9NSY2 213 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 TMEM74BQ9NUR3 256 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 EXD2Q9NVH0 621 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 DDX18Q9NVP1 670 aaKnown RBP7.55□□□□□ -1.2
COL4A5-208ENST00000505728 SOHLH2Q9NX45 425 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 GIN1Q9NXP7 522 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 NDUFAF4Q9P032 175 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 C3orf18Q9UK00 162 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 CLCA2Q9UQC9 943 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 SAMHD1Q9Y3Z3 626 aaKnown RBP7.55□□□□□ -1.2
COL4A5-208ENST00000505728 MAGED1Q9Y5V3 778 aaPredicted RBP7.55□□□□□ -1.2
COL4A5-208ENST00000505728 ENPP4Q9Y6X5 453 aa7.55□□□□□ -1.2
COL4A5-208ENST00000505728 MN1Q10571 1320 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 A0A0A6YYC8 382 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 A0A1W2PS29 197 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 PRAMEF27A3QJZ7 478 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 H0YIG0 161 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 I3L1I5 382 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 TNFRSF11BO00300 401 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 SYT5O00445 386 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 SLC16A6O15403 523 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 TOX3O15405 576 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 HS6ST1O60243 411 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 FGF17O60258 216 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 UGT2B11O75310 529 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 RDH16O75452 317 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 DIRAS1O95057 198 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 IFNW1P05000 195 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 FESP07332 822 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 MSL3P1P0C860 447 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 ANXA8P13928 327 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 NT5EP21589 574 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 PRKACGP22612 351 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 CD1CP29017 333 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 RRM2P31350 389 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 XCR1P46094 333 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 ARL4DP49703 201 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 SMIM11AP58511 58 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 HSD11B2P80365 405 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 IGLV3-21P80748 117 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 MYBPC1Q00872 1141 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 CFHR1Q03591 330 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 MAP4K2Q12851 820 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 IL18R1Q13478 541 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 SF3A2Q15428 464 aaKnown RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 NR0B2Q15466 257 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 LTB4RQ15722 352 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 DUSP7Q16829 419 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 ZNF628Q5EBL2 1059 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 RPS26P11Q5JNZ5 115 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 EXOSC6Q5RKV6 272 aaKnown RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 FHL5Q5TD97 284 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 YOD1Q5VVQ6 348 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 NKAIN2Q5VXU1 208 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 KDM4DQ6B0I6 523 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 HEPHL1Q6MZM0 1159 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 FAM111BQ6SJ93 734 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 CEP68Q76N32 757 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 TSEN54Q7Z6J9 526 aaKnown RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 HS3ST5Q8IZT8 346 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 D2HGDHQ8N465 521 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 FAM181AQ8N9Y4 354 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 TMEM52Q8NDY8 209 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 OR7G2Q8NG99 324 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 OR5T3Q8NGG3 340 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 OR5D16Q8NGK9 328 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 OR4C6Q8NH72 309 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 SAP25Q8TEE9 199 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 GIPC3Q8TF64 312 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 CTHRC1Q96CG8 243 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 MVB12AQ96EY5 273 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 C16orf58Q96GQ5 468 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 SLC41A2Q96JW4 573 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 ZNF354BQ96LW1 612 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 COL21A1Q96P44 957 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 TRNT1Q96Q11 434 aaKnown RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 PIP5K1AQ99755 562 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 DPYSL5Q9BPU6 564 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 TREX2Q9BQ50 279 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 YIPF4Q9BSR8 244 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 SPRTNQ9H040 489 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 ARRDC1-AS1Q9H2J1 176 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 SMOC1Q9H4F8 434 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 PRTFDC1Q9NRG1 225 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 FAM118AQ9NWS6 357 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 IRAK4Q9NWZ3 460 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 VNN3Q9NY84 501 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 PDP1Q9P0J1 537 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-208ENST00000505728 SEC14L3Q9UDX4 400 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 CDC14AQ9UNH5 594 aa7.54□□□□□ -1.2
COL4A5-208ENST00000505728 ADAMTS9Q9P2N4 1935 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 PRAMEF25A6NGN4 478 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 TTC36A6NLP5 189 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 FAM227AF5H4B4 570 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 H3BNH8 94 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 TM4SF5O14894 197 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 CASC3O15234 703 aaKnown RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 LDB3O75112 727 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 COQ9O75208 318 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms