RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 TMEM225Q6GV28 225 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ARHGAP11AQ6P4F7 1023 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 PRSS57Q6UWY2 283 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 LACC1Q8IV20 430 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 UBQLNLQ8IYU4 475 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF683Q8IZ20 524 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ANKFN1Q8N957 763 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 SYT14Q8NB59 555 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ELMO2Q96JJ3 720 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CPXM1Q96SM3 734 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 MEIS3Q99687 375 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 FUCA2Q9BTY2 467 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 HOXD1Q9GZZ0 328 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 FN3KRPQ9HA64 309 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 KCNK13Q9HB14 408 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 NMUR1Q9HB89 426 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 HYPKQ9NX55 129 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 GPR83Q9NYM4 423 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 KLK11Q9UBX7 282 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 LNPEPQ9UIQ6 1025 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF346Q9UL40 294 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC9A8Q9Y2E8 581 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 TMED5Q9Y3A6 229 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 WDR45Q9Y484 360 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 NSD2O96028 1365 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 STK36Q9NRP7 1315 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 IGHV4-4A0A075B6R2 117 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 NPIPA5A0A0B4J1W7 369 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 A0A0J9YVX5 310 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 A0A0U1RQS6 177 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 FBLL1A6NHQ2 334 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 ASB14A6NK59 587 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 LRRC30A6NM36 301 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 NPIPA5E9PKD4 350 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 H0YL77 283 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 EI24O14681 340 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 TNFSF12O43508 249 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR1F1O43749 312 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 KHDRBS3O75525 346 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 CEACAM4O75871 244 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 TM7SF2O76062 418 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 NADKO95544 446 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 T-ENOLP0DO92 83 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 DBTP11182 482 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 HNF1AP20823 631 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 TSFMP43897 325 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 LEPRP48357 1165 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 PAX9P55771 341 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 RPL23AP62750 156 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 PJVKQ0ZLH3 352 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZP4Q12836 540 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 BNIP1Q12981 228 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 ENPP2Q13822 863 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC17A1Q14916 467 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 LINC01620Q4KN68 170 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 BEND6Q5SZJ8 279 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 ATF7IP2Q5U623 682 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 LEG1Q6P5S2 330 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF562Q6V9R5 426 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 SYT10Q6XYQ8 523 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 Q7L0L9 218 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 C16orf62Q7Z3J2 963 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 HOGA1Q86XE5 327 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 NBPF5PQ86XG9 351 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 TBC1D10CQ8IV04 446 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 RAB42Q8N4Z0 105 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 TMEM178AQ8NBL3 297 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 RELL2Q8NC24 303 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR9Q2Q8NGE9 314 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 SMAP2Q8WU79 429 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 EVPLQ92817 2033 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 MYLPFQ96A32 169 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 ALG9Q9H6U8 611 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 ELOVL3Q9HB03 270 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZFP57Q9NU63 452 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 BAIAP2L1Q9UHR4 511 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 PURGQ9UJV8 347 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 C2CD2Q9Y426 696 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 RNF115Q9Y4L5 304 aa3.35□□□□□ -1.87
TRAPPC13-208ENST00000505553 FAM172BPA6NC97 362 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 E9PBE3 544 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 NEDD8-MDP1E9PL57 170 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 SLCO1B7G3V0H7 640 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 H3BMH7 237 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 CYB561D2O14569 222 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 ARPC3O15145 178 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 LCMT2O60294 686 aaKnown RBP3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 TPST2O60704 377 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 ECDO95905 644 aaPredicted RBP3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 ALPLP05186 524 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 NT5EP21589 574 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 PGFP49763 221 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 ILF3Q12906 894 aaKnown RBP eCLIP3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 TPGS2Q68CL5 300 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 C19orf48Q6RUI8 117 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 METAP1DQ6UB28 335 aaPredicted RBP3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 TMEM184AQ6ZMB5 413 aa3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 Q6ZPB1 254 aaPredicted RBP3.34□□□□□ -1.88
TRAPPC13-208ENST00000505553 CCDC73Q6ZRK6 1079 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms