RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GPR55Q9Y2T6 319 aaPredicted RBP23.2■■□□□ 1.3
LSM6-202ENST00000502781 A8MVJ9 347 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 COQ9O75208 318 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 EFNA1P20827 205 aaPredicted RBP23.19■■□□□ 1.3
LSM6-202ENST00000502781 DRD5P21918 477 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 IL12AP29459 219 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 MRPL19P49406 292 aaKnown RBP23.19■■□□□ 1.3
LSM6-202ENST00000502781 NR0B1P51843 470 aaKnown RBP23.19■■□□□ 1.3
LSM6-202ENST00000502781 DCAF7P61962 342 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 PHC1P78364 1004 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 ZNF766Q5HY98 468 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 OR4F3Q6IEY1 312 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 TAGAPQ8N103 731 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 EPN3Q9H201 632 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 DDX18Q9NVP1 670 aaKnown RBP23.19■■□□□ 1.3
LSM6-202ENST00000502781 HPF1Q9NWY4 346 aa23.19■■□□□ 1.3
LSM6-202ENST00000502781 E9PBE3 544 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 RNASET2O00584 256 aaKnown RBP23.18■■□□□ 1.3
LSM6-202ENST00000502781 SLC25A12O75746 678 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 FBXO45P0C2W1 286 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 KIR3DL1P43629 444 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 PGS1Q32NB8 556 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 SPANXN4Q5MJ08 99 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 SLC25A25Q6KCM7 469 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 MDGA2Q7Z553 956 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 HSPBAP1Q96EW2 488 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 LCORQ96JN0 433 aaPredicted RBP23.18■■□□□ 1.3
LSM6-202ENST00000502781 MARK4Q96L34 752 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 SGCZQ96LD1 299 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 HES7Q9BYE0 225 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 TRIM4Q9C037 500 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 FOLH1BQ9HBA9 442 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 FGFR1OP2Q9NVK5 253 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 ZIM2Q9NZV7 527 aa23.18■■□□□ 1.3
LSM6-202ENST00000502781 FRG2CA6NGY1 282 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 TO15178 435 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 NME6O75414 186 aaPredicted RBP23.17■■□□□ 1.3
LSM6-202ENST00000502781 SP1P08047 785 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 CT45A8P0DMV1 189 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 CT45A9P0DMV2 189 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 CD46P15529 392 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 GPC1P35052 558 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 ZFP36L2P47974 494 aaKnown RBP23.17■■□□□ 1.3
LSM6-202ENST00000502781 NME5P56597 212 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 INAQ16352 499 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 CT45A2Q5DJT8 189 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 IL20RBQ6UXL0 311 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 DND1Q8IYX4 353 aaKnown RBP23.17■■□□□ 1.3
LSM6-202ENST00000502781 GLB1L3Q8NCI6 653 aaPredicted RBP23.17■■□□□ 1.3
LSM6-202ENST00000502781 RFWD2Q8NHY2 731 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 HOXB13Q92826 284 aaPredicted RBP23.17■■□□□ 1.3
LSM6-202ENST00000502781 SPACA9Q96E40 222 aaPredicted RBP23.17■■□□□ 1.3
LSM6-202ENST00000502781 NEUROD4Q9HD90 331 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 SH2D2AQ9NP31 389 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 NPHS2Q9NP85 383 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 MAP10Q9P2G4 905 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 ERVK-11Q9UQG0 969 aa23.17■■□□□ 1.3
LSM6-202ENST00000502781 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 TTLL8A6PVC2 850 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 ACOX3O15254 700 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 NME2P1O60361 137 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 ERN1O75460 977 aaKnown RBP23.16■■□□□ 1.3
LSM6-202ENST00000502781 C6orf47O95873 294 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 NME2P22392 152 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 PSG6Q00889 435 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 RPS6KA2Q15349 733 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 FAM174BQ3ZCQ3 159 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 CGB2Q6NT52 195 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 GOLM1Q8NBJ4 401 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 TMEM178AQ8NBL3 297 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 TMEM125Q96AQ2 219 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 GIMAP5Q96F15 307 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 THOC1Q96FV9 657 aaKnown RBP23.16■■□□□ 1.3
LSM6-202ENST00000502781 C5orf34Q96MH7 638 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 ZNF317Q96PQ6 595 aaPredicted RBP23.16■■□□□ 1.3
LSM6-202ENST00000502781 BARD1Q99728 777 aaKnown RBP23.16■■□□□ 1.3
LSM6-202ENST00000502781 NPFFR2Q9Y5X5 522 aa23.16■■□□□ 1.3
LSM6-202ENST00000502781 PRSS51A0A1B0GVH4 220 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 EMC8O43402 210 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 SLC22A3O75751 556 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 MAP3K8P41279 467 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 NRG3P56975 720 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 HBA1P69905 142 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 INPP5JQ15735 1006 aaPredicted RBP23.15■■□□□ 1.3
LSM6-202ENST00000502781 NTRK2Q16620 822 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 ANXA8L1Q5VT79 327 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 NPSR1Q6W5P4 371 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 TMEM64Q6YI46 380 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 RTL4Q6ZR62 310 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 SNRNP40Q96DI7 357 aaKnown RBP23.15■■□□□ 1.3
LSM6-202ENST00000502781 FAM120BQ96EK7 910 aaKnown RBP23.15■■□□□ 1.3
LSM6-202ENST00000502781 MAGED4Q96JG8 741 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 CXorf36Q9H7Y0 433 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 C3orf14Q9HBI5 128 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 DCTN4Q9UJW0 460 aa23.15■■□□□ 1.3
LSM6-202ENST00000502781 SPENQ96T58 3664 aaKnown RBP23.15■■□□□ 1.3
LSM6-202ENST00000502781 VIMP08670 466 aaKnown RBP23.14■■□□□ 1.3
LSM6-202ENST00000502781 NAGAP17050 411 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 ABCD3P28288 659 aa23.14■■□□□ 1.3
LSM6-202ENST00000502781 MLLT10P55197 1068 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms