RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 PCDHGA2Q9Y5H1 932 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 F5H0A9 414 aaPredicted RBP16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 AXIN1O15169 862 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 RAB5BP61020 215 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 MEF2AQ02078 507 aaPredicted RBP16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 OVCA2Q8WZ82 227 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 EGLN2Q96KS0 407 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 RAD9AQ99638 391 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 RSPH9Q9H1X1 276 aaPredicted RBP16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 KLHL9Q9P2J3 617 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 GMEB2Q9UKD1 530 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 ZNF623O75123 536 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 RENP00797 406 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 PRH1P02810 166 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 BPIP17213 487 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 C22orf39Q6P5X5 142 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 KLHL24Q6TFL4 600 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 GRHL3Q8TE85 626 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 C16orf78Q8WTQ4 265 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 OR5M11Q96RB7 305 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 CSNK1G1Q9HCP0 422 aa16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 MRTO4Q9UKD2 239 aaKnown RBP16.37■□□□□ 0.21
HMGXB3-201ENST00000502717 UNC119BA6NIH7 251 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 OR7A17O14581 309 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 POP7O75817 140 aaKnown RBP16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 C1QBP02746 253 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 HTR1AP08908 422 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 GDI2P50395 445 aaKnown RBP16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 RAB8AP61006 207 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 POU4F2Q12837 409 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 MANEALQ5VSG8 457 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 ATCAYQ86WG3 371 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 CNOT9Q92600 299 aaKnown RBP16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 NKD1Q969G9 470 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 ECHDC3Q96DC8 303 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 CLIP3Q96DZ5 547 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 FMO6PO60774 539 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 VAMP1P23763 118 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 ITPKBP27987 946 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 HLA-DMAP28067 261 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 GKP32189 559 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 MMP12P39900 470 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 RPL35P42766 123 aaKnown RBP16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 DHPSP49366 369 aaPredicted RBP16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 WASH2PQ6VEQ5 465 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 COMMD6Q7Z4G1 85 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 IRF7Q92985 503 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 CDADC1Q9BWV3 514 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 MN1Q10571 1320 aaPredicted RBP16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 CSN2P05814 226 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 MTHFD2P13995 350 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 FOSL2P15408 326 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 ASAH1Q13510 395 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 FAM69AQ5T7M9 428 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 TMEM207Q6UWW9 146 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 PAQR9Q6ZVX9 377 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 WFIKKN2Q8TEU8 576 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 ZNF285Q96NJ3 590 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 TMEM175Q9BSA9 504 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 PLCXD1Q9NUJ7 323 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 ZBTB42B2RXF5 422 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 TEX46H3BTG2 121 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 FABP7O15540 132 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 B3GALT2O43825 422 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 C1QAP02745 245 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 CAP1Q01518 475 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 GK2Q14410 553 aaPredicted RBP16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 CTSL3PQ5NE16 218 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 TRIM46Q7Z4K8 759 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 OR10G6Q8NH81 332 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 ZFAND1Q8TCF1 268 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 NUS1Q96E22 293 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 SCGB3A2Q96PL1 93 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 GPER1Q99527 375 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 POTEKPQ9BYX7 375 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 GABARAPL1Q9H0R8 117 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 TLR9Q9NR96 1032 aa16.36■□□□□ 0.21
HMGXB3-201ENST00000502717 HYKKA2RU49 373 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 GABRR3A8MPY1 467 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 POLR1CO15160 346 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 PAK4O96013 591 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 ALDOBP05062 364 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 BTN1A1Q13410 526 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 PLK5Q496M5 336 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 ARSIQ5FYB1 569 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 TFGQ92734 400 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 PADI2Q9Y2J8 665 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 GOLGA4Q13439 2230 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 GTF2F2P13984 249 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 CCND3P30281 292 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 ATXN7L3Q14CW9 347 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 KLHL26Q53HC5 615 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 PDZD3Q86UT5 571 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 TXNL4BQ9NX01 149 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 TAS2R8Q9NYW2 309 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 DDX60LQ5H9U9 1706 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 A0A1W2PPK0 400 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 DRGXA6NNA5 263 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 KRBOX1C9JBD0 128 aa16.35■□□□□ 0.21
HMGXB3-201ENST00000502717 KCNK5O95279 499 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms