RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SLC5A2	P31639	672 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	PCGF2	P35227	344 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	RPS26	P62854	115 aa	Known RBP	11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	RBBP4	Q09028	425 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	CCNI	Q14094	377 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	VEZF1	Q14119	521 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	LASP1	Q14847	261 aa	Known RBP	11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	KPNB1	Q14974	876 aa	Known RBP	11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	NSDHL	Q15738	373 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	VMAC	Q2NL98	169 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	GCNT6	Q5T4J0	391 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	TMEM164	Q5U3C3	297 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	C1orf146	Q5VVC0	180 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	MLIP	Q5VWP3	458 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	CDC73	Q6P1J9	531 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	ERICH5	Q6P6B1	374 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	ANKRD37	Q7Z713	158 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	IFNE	Q86WN2	208 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	ZNF615	Q8N8J6	731 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	OR52E4	Q8NGH9	312 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	DOK4	Q8TEW6	326 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	RIT1	Q92963	219 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	C16orf58	Q96GQ5	468 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	SLC46A1	Q96NT5	459 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	WDR77	Q9BQA1	342 aa	Predicted RBP	11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	OR51I1	Q9H343	314 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	PIF1	Q9H611	641 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	A4GALT	Q9NPC4	353 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	ASCL3	Q9NQ33	180 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	EGFL7	Q9UHF1	273 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	C3orf18	Q9UK00	162 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	PADI1	Q9ULC6	663 aa		11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	PPIE	Q9UNP9	301 aa	Known RBP	11.32	□□□□□ -0.6
MATR3-231	ENST00000502394	LOC102723996	A0A087X1L8	192 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394		A0A1W2PQ72	361 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	TCRBV5S2	A0A599	114 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	ASNA1	O43681	348 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	COQ9	O75208	318 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	GCM2	O75603	506 aa	Predicted RBP	11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	HEXB	P07686	556 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	ACP2	P11117	423 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	MATN1	P21941	496 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	CD82	P27701	267 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	SSTR4	P31391	388 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	CRAT	P43155	626 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	KHK	P50053	298 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	EMD	P50402	254 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	GPR143	P51810	404 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	EMP2	P54851	167 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	CASP9	P55211	416 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	PCBP3	P57721	371 aa	Known RBP	11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	DSTN	P60981	165 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	GABRE	P78334	506 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	FUT5	Q11128	374 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	ZNF267	Q14586	743 aa	Predicted RBP	11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	MYBPC3	Q14896	1274 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	EXOSC7	Q15024	291 aa	Known RBP	11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	CYP51A1	Q16850	503 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	MFSD4B	Q5TF39	518 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	ZCCHC12	Q6PEW1	402 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	SHISA6	Q6ZSJ9	500 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	ESX1	Q8N693	406 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	ZSCAN1	Q8NBB4	408 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	NFAM1	Q8NET5	270 aa	Predicted RBP	11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	TNIP2	Q8NFZ5	429 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	OR7G1	Q8NGA0	311 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	OR52R1	Q8NGF1	315 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	OR2Y1	Q8NGV0	311 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	SNIP1	Q8TAD8	396 aa	Known RBP	11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	ZNF721	Q8TF20	911 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	CT55	Q8WUE5	264 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	FBXL20	Q96IG2	436 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	MAGED4	Q96JG8	741 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	VSTM2L	Q96N03	204 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	MESP1	Q9BRJ9	268 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	CRB3	Q9BUF7	120 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	ACTRT3	Q9BYD9	372 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	GORASP2	Q9H8Y8	452 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	PNO1	Q9NRX1	252 aa	Known RBP	11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	THUMPD1	Q9NXG2	353 aa	Known RBP	11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	GIN1	Q9NXP7	522 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	MAGEL2	Q9UJ55	1249 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	ERVK-19	Q9WJR5	959 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	AHCTF1	Q8WYP5	2266 aa		11.31	□□□□□ -0.6
MATR3-231	ENST00000502394	TCRBV3S1	A0A5B6	114 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	AQP12B	A6NM10	295 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	C17orf105	B2RV13	164 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	CXCR6	O00574	342 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	MGRN1	O60291	552 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	RAD1	O60671	282 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	NME6	O75414	186 aa	Predicted RBP	11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	NKX2-2	O95096	273 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	IFNA16	P05015	189 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	C8B	P07358	591 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	CD63	P08962	238 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	TFPT	P0C1Z6	253 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	OR12D1	P0DN82	309 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	NCK1	P16333	377 aa		11.3	□□□□□ -0.6
MATR3-231	ENST00000502394	STAT5A	P42229	794 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms