RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 ARFIP2P53365 341 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 SEC24CP53992 1094 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 DCAF7P61962 342 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 HBA1P69905 142 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 ARG2P78540 354 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 LRRC74AQ0VAA2 488 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 KLRB1Q12918 225 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 RCAN2Q14206 197 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 SQLEQ14534 574 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 SOWAHCQ53LP3 525 aaPredicted RBP13.11□□□□□ -0.31
RNF4-202ENST00000502316 ZNF468Q5VIY5 522 aaPredicted RBP13.11□□□□□ -0.31
RNF4-202ENST00000502316 PAOXQ6QHF9 649 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 GPALPP1Q8IXQ4 340 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 CLECL1Q8IZS7 167 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 VPS37AQ8NEZ2 397 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 C10orf82Q8WW14 230 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 HOXB13Q92826 284 aaPredicted RBP13.11□□□□□ -0.31
RNF4-202ENST00000502316 FAM120BQ96EK7 910 aaKnown RBP13.11□□□□□ -0.31
RNF4-202ENST00000502316 CCDC115Q96NT0 180 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 UTP23Q9BRU9 249 aaKnown RBP13.11□□□□□ -0.31
RNF4-202ENST00000502316 ITPAQ9BY32 194 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 CXorf36Q9H7Y0 433 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 FOLH1BQ9HBA9 442 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 BTNL2Q9UIR0 455 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 ERVK-11Q9UQG0 969 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 B3GNT3Q9Y2A9 372 aa13.11□□□□□ -0.31
RNF4-202ENST00000502316 GPR55Q9Y2T6 319 aaPredicted RBP13.11□□□□□ -0.31
RNF4-202ENST00000502316 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 GMNCA6NCL1 334 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 FRG2CA6NGY1 282 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 TO15178 435 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 ACOX3O15254 700 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 EMC8O43402 210 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 NEURL1O76050 574 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 CT45A8P0DMV1 189 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 CT45A9P0DMV2 189 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 DRD5P21918 477 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 CASRP41180 1078 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 MAP3K8P41279 467 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 CYB561P49447 251 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 POLR2JP52435 117 aaKnown RBP13.1□□□□□ -0.31
RNF4-202ENST00000502316 DGKQP52824 942 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 GNGT1P63211 74 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 PSPHP78330 225 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 PRR5P85299 388 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 TLR1Q15399 786 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 CT45A2Q5DJT8 189 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 HLA-DQA1Q5Y7H0 255 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 SLC6A19Q695T7 634 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 LYPD8Q6UX82 237 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 MSANTD1Q6ZTZ1 278 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 ZNF227Q86WZ6 799 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 FUNDC1Q8IVP5 155 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 TAGAPQ8N103 731 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 TMEM156Q8N614 296 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 MDS2Q8NDY4 140 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 GOT1L1Q8NHS2 421 aaPredicted RBP13.1□□□□□ -0.31
RNF4-202ENST00000502316 SLC22A8Q8TCC7 542 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 SFXN5Q8TD22 340 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 PNPLA2Q96AD5 504 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 MOAP1Q96BY2 351 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 GIMAP5Q96F15 307 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 LCORQ96JN0 433 aaPredicted RBP13.1□□□□□ -0.31
RNF4-202ENST00000502316 MS4A4EQ96PG1 132 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 SIGLEC12Q96PQ1 595 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 OR52E6Q96RD3 313 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 NXF5Q9H1B4 397 aaKnown RBP13.1□□□□□ -0.31
RNF4-202ENST00000502316 RABEP2Q9H5N1 569 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 C3orf14Q9HBI5 128 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 PCDHGB6Q9Y5F9 930 aa13.1□□□□□ -0.31
RNF4-202ENST00000502316 TRAV17A0A0B4J275 112 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 ERN1O75460 977 aaKnown RBP13.09□□□□□ -0.31
RNF4-202ENST00000502316 OR6B1O95007 311 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 F10P00742 488 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 FBXO45P0C2W1 286 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 NCF2P19878 526 aaPredicted RBP13.09□□□□□ -0.31
RNF4-202ENST00000502316 DRD4P21917 467 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 SOX3P41225 446 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 NR0B1P51843 470 aaKnown RBP13.09□□□□□ -0.31
RNF4-202ENST00000502316 PSG6Q00889 435 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 OR1C1Q15619 314 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 ZNF791Q3KP31 576 aaPredicted RBP13.09□□□□□ -0.31
RNF4-202ENST00000502316 NADK2Q4G0N4 442 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 EXOSC6Q5RKV6 272 aaKnown RBP13.09□□□□□ -0.31
RNF4-202ENST00000502316 BLOC1S3Q6QNY0 202 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 OPN5Q6U736 354 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 NPSR1Q6W5P4 371 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 ANKRD46Q86W74 232 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 DND1Q8IYX4 353 aaKnown RBP13.09□□□□□ -0.31
RNF4-202ENST00000502316 CPSF7Q8N684 471 aaKnown RBP13.09□□□□□ -0.31
RNF4-202ENST00000502316 HORMAD2Q8N7B1 307 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 TEX19Q8NA77 164 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 CATSPER1Q8NEC5 780 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 NUP43Q8NFH3 380 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 OR56A1Q8NGH5 318 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 ASB15Q8WXK1 588 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 HSPBAP1Q96EW2 488 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 MAGED4Q96JG8 741 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 LMF2Q9BU23 707 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms