RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 MAGEA3P43357 314 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 ASCL1P50553 236 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 LIM2P55344 173 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 AP1S2P56377 157 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 HSD17B7P56937 341 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SESN3P58005 492 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 STXBP1P61764 594 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 KCNJ2P63252 427 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 ASPHQ12797 758 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SLC10A1Q14973 349 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TSNQ15631 228 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 ACKR1Q16570 336 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 FAM174BQ3ZCQ3 159 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SPANXN3Q5MJ09 141 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TEDDM1Q5T9Z0 273 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 RNASEH2BQ5TBB1 312 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TRIM40Q6P9F5 258 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TRMT10BQ6PF06 316 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 POMZP3Q6PJE2 187 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SBSNQ6UWP8 590 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TMIGD1Q6UXZ0 262 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 DGAT2L6Q6ZPD8 337 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 RTL4Q6ZR62 310 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 KIAA0408Q6ZU52 694 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SEM1Q6ZVN7 128 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TRILQ7L0X0 811 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TMEM132CQ8N3T6 1108 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 FAM109AQ8N4B1 249 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 PPM1NQ8N819 430 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SNX31Q8N9S9 440 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TRIM58Q8NG06 486 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 GABPB2Q8TAK5 448 aaPredicted RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 PTPMT1Q8WUK0 201 aaPredicted RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 ANKRD49Q8WVL7 239 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 EXT2Q93063 718 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 PPWD1Q96BP3 646 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 MS4A6EQ96DS6 147 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 F2RL3Q96RI0 385 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 MAPKAP1Q9BPZ7 522 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 FAM173AQ9BQD7 235 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SORBS1Q9BX66 1292 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 REXO4Q9GZR2 422 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 DDX47Q9H0S4 455 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 IL1RL2Q9HB29 575 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 ADAP2Q9NPF8 381 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SACM1LQ9NTJ5 587 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 WWOXQ9NZC7 414 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SPRR3Q9UBC9 169 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 MYOTQ9UBF9 498 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 CTNNAL1Q9UBT7 734 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 MRPS33Q9Y291 106 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 TMA7Q9Y2S6 64 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 ATG4BQ9Y4P1 393 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 CLDN16Q9Y5I7 305 aa5.06□□□□□ -1.6
SPTA1-209ENST00000498708 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 EPPK1P58107 5090 aaKnown RBP5.06□□□□□ -1.6
SPTA1-209ENST00000498708 MED12Q93074 2177 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 ROS1P08922 2347 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 A0A088AWK7 358 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 C15orf38-AP3S2A0A0A6YYH1 394 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 ZC3H12DA2A288 527 aaKnown RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 LRIT2A6NDA9 550 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 CYR61O00622 381 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 AQP7O14520 342 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 CCNT2O60583 730 aaKnown RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 PRAMEF4O60810 478 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 CTNSO60931 367 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 PRKRAO75569 313 aaKnown RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 TRAPPC6AO75865 159 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 GLSO94925 669 aaPredicted RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 TBX6O95947 436 aaPredicted RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 IGHG3P01860 377 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 CELA3BP08861 270 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 ENO2P09104 434 aaPredicted RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 PCNAP12004 261 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 GNAZP19086 355 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 ZNF10P21506 573 aaPredicted RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 CPN2P22792 545 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 MSH2P43246 934 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 HSPA7P48741 367 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 CLK1P49759 484 aaKnown RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 MTTPP55157 894 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 TAS2R39P59534 338 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 DDX39BQ13838 428 aaKnown RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 DOC2AQ14183 400 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 KIR3DS1Q14943 382 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 TOMM20Q15388 145 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 ELAVL1Q15717 326 aaKnown RBP5.05□□□□□ -1.6
SPTA1-209ENST00000498708 PPP1R3AQ16821 1122 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 FBXL19-AS1Q494R0 122 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 RIPPLY2Q5TAB7 128 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 NDUFAF5Q5TEU4 345 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 PRAMEF9Q5VWM5 478 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 ABHD17CQ6PCB6 329 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 OPN5Q6U736 354 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 CYP2R1Q6VVX0 501 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 C12orf54Q6X4T0 127 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 TMEM64Q6YI46 380 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 ZNF793Q6ZN11 406 aa5.05□□□□□ -1.6
SPTA1-209ENST00000498708 STRA8Q7Z7C7 330 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms