RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	EXD3	Q8N9H8	876 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ANKRD53	Q8N9V6	530 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CAMKV	Q8NCB2	501 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	OR7A2P	Q8NGA2	310 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	OR10G6	Q8NH81	332 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	WDR48	Q8TAF3	677 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CREB3L4	Q8TEY5	395 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZFAND2B	Q8WV99	257 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	POP5	Q969H6	163 aa	Known RBP	5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	GFM2	Q969S9	779 aa	Known RBP	5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TMEM125	Q96AQ2	219 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PPCDC	Q96CD2	204 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	COQ8B	Q96D53	544 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PPM1M	Q96MI6	270 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	OR2A14	Q96R47	310 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PANX1	Q96RD7	426 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	F2RL3	Q96RI0	385 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NRTN	Q99748	197 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	KCTD14	Q9BQ13	255 aa	Predicted RBP	5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TBCD	Q9BTW9	1192 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FAIM2	Q9BWQ8	316 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NLN	Q9BYT8	704 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	REXO4	Q9GZR2	422 aa	Known RBP	5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TWSG1	Q9GZX9	223 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PAIP1	Q9H074	479 aa	Known RBP	5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CDIP1	Q9H305	208 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	VCX	Q9H320	206 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZNF703	Q9H7S9	590 aa	Predicted RBP	5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	DDX31	Q9H8H2	851 aa	Known RBP	5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	IL21R	Q9HBE5	538 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	S100A14	Q9HCY8	104 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MIEF1	Q9NQG6	463 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CMTM6	Q9NX76	183 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SPHK1	Q9NYA1	384 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SH3BP4	Q9P0V3	963 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ACTR3B	Q9P1U1	418 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	BTNL2	Q9UIR0	455 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PACSIN3	Q9UKS6	424 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CORO2B	Q9UQ03	480 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	KLK4	Q9Y5K2	254 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	HEMK1	Q9Y5R4	338 aa	Predicted RBP	5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CSNK1G3	Q9Y6M4	447 aa		5	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CEP192	Q8TEP8	1941 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	NF1	P21359	2839 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	IGKV1-8	A0A0C4DH67	115 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325		A0A1W2PRB8	838 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	OR2A25	A4D2G3	310 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	OR5K3	A6NET4	321 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PRORSD1P	A6NEY8	169 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	LILRA5	A6NI73	299 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	AQP12B	A6NM10	295 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	RHPN2P1	A8MT19	583 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FXYD1	O00168	92 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CLIC1	O00299	241 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	RNASET2	O00584	256 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TXNDC9	O14530	226 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ACOT8	O14734	319 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZSCAN9	O15535	394 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ERI3	O43414	337 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TBX1	O43435	398 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	DFNA5	O60443	496 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PIAS2	O75928	621 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	KRT36	O76013	467 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SORBS2	O94875	1100 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	UBXN7	O94888	489 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	IL3	P08700	152 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZCCHC18	P0CG32	403 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ALPPL2	P10696	532 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	UMPS	P11172	480 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PIM1	P11309	404 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ANPEP	P15144	967 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ACADS	P16219	412 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	HOXB6	P17509	224 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ATP6V1C1	P21283	382 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CDH3	P22223	829 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	IL10	P22301	178 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ELAVL4	P26378	380 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MSX2	P35548	267 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	VHL	P40337	213 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	SSR2	P43308	183 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	RXRG	P48443	463 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ARRB1	P49407	418 aa	Predicted RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	GSK3B	P49841	420 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PLA2G16	P53816	162 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PHC1	P78364	1004 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PLIN5	Q00G26	463 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MS4A2	Q01362	244 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ROR2	Q01974	943 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	KLC1	Q07866	573 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	FOXL1	Q12952	345 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CCNI	Q14094	377 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TAF11	Q15544	211 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	PRSS53	Q2L4Q9	553 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ADPRM	Q3LIE5	342 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	C14orf28	Q4W4Y0	310 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	CCDC157	Q569K6	752 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	MTX3	Q5HYI7	312 aa		4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.99	□□□□□ -1.61
HMGXB4-208	ENST00000498325	TOR1AIP1	Q5JTV8	583 aa		4.99	□□□□□ -1.61

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