RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	LALBA	P00709	142 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	JUP	P14923	745 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	IL1RN	P18510	177 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	RECQL	P46063	649 aa	Predicted RBP	10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	LRRC37A5P	Q49AS3	106 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	RFLNA	Q6ZTI6	216 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ANKRD53	Q8N9V6	530 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	DUSP18	Q8NEJ0	188 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TMEM163	Q8TC26	289 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SMAP2	Q8WU79	429 aa	Predicted RBP	10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	POP5	Q969H6	163 aa	Known RBP	10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SORCS2	Q96PQ0	1159 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OR51V1	Q9H2C8	321 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PPP1R3E	Q9H7J1	279 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	THSD1	Q9NS62	852 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZNF282	Q9UDV7	671 aa	Predicted RBP	10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CSNK1G3	Q9Y6M4	447 aa		10.06	□□□□□ -0.8
TRAPPC12-223	ENST00000497597		E7EQ34	232 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	KLHL18	O94889	574 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	NR2F1	P10589	423 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PPIB	P23284	216 aa	Known RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PCGF2	P35227	344 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SLC11A2	P49281	568 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	WNT3	P56703	355 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TAS2R50	P59544	299 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	DSC1	Q08554	894 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SYTL3	Q4VX76	610 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	BEX5	Q5H9J7	111 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ANXA8L1	Q5VT79	327 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	HAGHL	Q6PII5	290 aa	Predicted RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ADGRG3	Q86Y34	549 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	NANP	Q8TBE9	248 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SLC22A8	Q8TCC7	542 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	LRRC46	Q96FV0	321 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ATF6B	Q99941	703 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ACBD6	Q9BR61	282 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	FAIM2	Q9BWQ8	316 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	MRTO4	Q9UKD2	239 aa	Known RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	COL11A2	P13942	1736 aa	Predicted RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597		A0A1W2PRB8	838 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SGCE	O43556	437 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	STATH	P02808	62 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	KLK1	P06870	262 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SNRPB	P14678	240 aa	Known RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PITPNB	P48739	271 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	YBEY	P58557	167 aa	Predicted RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SYT14P1	Q58G82	188 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	MEDAG	Q5VYS4	303 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	NCEH1	Q6PIU2	408 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TMEM91	Q6ZNR0	172 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	FGD2	Q7Z6J4	655 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TSPAN33	Q86UF1	283 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	LRRTM4	Q86VH4	590 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OR4K5	Q8NGD3	323 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	EXOSC8	Q96B26	276 aa	Known RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	KLHL15	Q96M94	604 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	MVB12B	Q9H7P6	319 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TMEM45A	Q9NWC5	275 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	FTSJ1	Q9UET6	329 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SHISA3	A0PJX4	238 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ANXA2P2	A6NMY6	339 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	DISC1	C4P0D8	188 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SCAMP2	O15127	329 aa	Known RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PI15	O43692	258 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ETHE1	O95571	254 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	NTN1	O95631	604 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	S100A9	P06702	114 aa	Known RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PTHLH	P12272	177 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PTX3	P26022	381 aa	Predicted RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZNF385B	Q569K4	471 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	GPAT4	Q86UL3	456 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZNF687	Q8N1G0	1237 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	BMPER	Q8N8U9	685 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SLC6A18	Q96N87	628 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SLC38A2	Q96QD8	506 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TSNAX	Q99598	290 aa	Known RBP	10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	EMC7	Q9NPA0	242 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CORO2B	Q9UQ03	480 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ERVK-19	Q9WJR5	959 aa		10.05	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZC3H12D	A2A288	527 aa	Known RBP	10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	RTCA	O00442	366 aa	Known RBP	10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	REM1	O75628	298 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	RAB3A	P20336	220 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	MRPL19	P49406	292 aa	Known RBP	10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	DGKG	P49619	791 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	MANF	P55145	182 aa	Known RBP	10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	LIM2	P55344	173 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OR5M10	Q6IEU7	315 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CDC73	Q6P1J9	531 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	OXR1	Q8N573	874 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ABHD1	Q96SE0	405 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	SLC6A17	Q9H1V8	727 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	NT5DC2	Q9H857	520 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	BRD9	Q9H8M2	597 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	GULP1	Q9UBP9	304 aa		10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	GCM2	O75603	506 aa	Predicted RBP	10.04	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	RP2	O75695	350 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms